ENSLOCG00000015055 (Lepisosteus oculatus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSLOCG00000015055 T014597_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.744 0.826
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.744 0.826
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.667 0.674
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.627 0.709
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.627 0.709
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.627 0.709
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.627 0.709
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.511 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000018527 ARID/BRIGHT 22 108
ENSLOCP00000018529 ARID/BRIGHT 59 145

Links

Other ARID/BRIGHT family TFs
Other Lepisosteus oculatus TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Myog Mus musculus ENSMUSG00000026459 D 0.000
Myf5 Mus musculus ENSMUSG00000000435 D 0.000
MYF5 Homo sapiens ENSG00000111049 D 0.000
MYOG Homo sapiens ENSG00000122180 D 0.000
MYF6 Homo sapiens ENSG00000111046 D 0.000
Myf6 Mus musculus ENSMUSG00000035923 D 0.000
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I 0.000
ENSSTOG00000015810 Ictidomys tridecemlineatus ENSSTOG00000015810 I 0.000
ENSSTOG00000028049 Ictidomys tridecemlineatus ENSSTOG00000028049 I 0.000
MYF6 Sus scrofa ENSSSCG00000026533 I 0.000
ENSTSYG00000003282 Tarsius syrichta ENSTSYG00000003282 I 0.000
ENSSSCG00000015475 Sus scrofa ENSSSCG00000015475 I 0.000
MYF5 Sus scrofa ENSSSCG00000000937 I 0.000
ENSSHAG00000016307 Sarcophilus harrisii ENSSHAG00000016307 I 0.000
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I 0.000
MYF6 Tupaia belangeri ENSTBEG00000007822 I 0.000
MYF5 Tupaia belangeri ENSTBEG00000008363 I 0.000
MYOG Tupaia belangeri ENSTBEG00000017364 I 0.000
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I 0.000
myf6 Takifugu rubripes ENSTRUG00000010842 I 0.000
myf5 Takifugu rubripes ENSTRUG00000010781 I 0.000
myog Takifugu rubripes ENSTRUG00000001200 I 0.000
MYOG Taeniopygia guttata ENSTGUG00000001380 I 0.000
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I 0.000
myf5 Tetraodon nigroviridis ENSTNIG00000011406 I 0.000
myog Tetraodon nigroviridis ENSTNIG00000007278 I 0.000
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I 0.000
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I 0.000
MYF6 Taeniopygia guttata ENSTGUG00000007751 I 0.000
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I 0.000
MYF5 Sorex araneus ENSSARG00000008217 I 0.000
MYF6 Sorex araneus ENSSARG00000008211 I 0.000
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I 0.000
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I 0.000
ENSPFOG00000017279 Poecilia formosa ENSPFOG00000017279 I 0.000
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I 0.000
MYOG Procavia capensis ENSPCAG00000006860 I 0.000
MYF5 Procavia capensis ENSPCAG00000001722 I 0.000
MYF6 Procavia capensis ENSPCAG00000001692 I 0.000
ENSPANG00000020394 Papio anubis ENSPANG00000020394 I 0.000
ENSPANG00000016865 Papio anubis ENSPANG00000016865 I 0.000
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I 0.000
myf6 Oryzias latipes ENSORLG00000016261 I 0.000
ENSPPYG00000000338 Pongo abelii ENSPPYG00000000338 I 0.000
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I 0.000
ENSPPYG00000004800 Pongo abelii ENSPPYG00000004800 I 0.000
Myog Rattus norvegicus ENSRNOG00000030743 I 0.000
Myf6 Rattus norvegicus ENSRNOG00000004878 I 0.000
Myf5 Rattus norvegicus ENSRNOG00000004768 I 0.000
MYOG Pteropus vampyrus ENSPVAG00000013141 I 0.000
MYF5 Pteropus vampyrus ENSPVAG00000003336 I 0.000
MYF6 Pteropus vampyrus ENSPVAG00000003335 I 0.000
MYF5 Pan troglodytes ENSPTRG00000005261 I 0.000
MYF6 Pan troglodytes ENSPTRG00000005260 I 0.000
MYOG Pan troglodytes ENSPTRG00000001866 I 0.000
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I 0.000
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I 0.000
myf5 Oryzias latipes ENSORLG00000016257 I 0.000
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.000
ABU42126 Xenopus laevis ABU42126 I 0.000
AAO11649 Xenopus laevis AAO11649 I 0.000
AAL11024 Xenopus tropicalis AAL11024 I 0.000
AAB22139 Xenopus laevis AAB22139 I 0.000
AAB21580 Xenopus laevis AAB21580 I 0.000
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.000
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I 0.000
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I 0.000
Pvit_15256 Pogona vitticeps Pvit_15256 I 0.000
Pvit_10244 Pogona vitticeps Pvit_10244 I 0.000
Ogr08795 Ophisaurus gracilis Ogr08795 I 0.000
CLEC002330 Cimex lectularius CLEC002330 I 0.000
myog Xenopus tropicalis XB-GENE-490105 I 0.000
myf5 Xenopus tropicalis XB-GENE-493550 I 0.000
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.000
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.000
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.000
D918_04086 Trichuris suis D918_04086 I 0.000
D917_06339 Trichinella nativa D917_06339 I 0.000
myf6.S Xenopus laevis XB-GENE-998208 I 0.000
myf6 Xenopus tropicalis XB-GENE-998203 I 0.000
myf5.L Xenopus laevis XB-GENE-866267 I 0.000
myog.S Xenopus laevis XB-GENE-865934 I 0.000
myog.L Xenopus laevis XB-GENE-6252382 I 0.000
myf6.L Xenopus laevis XB-GENE-6252334 I 0.000
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I 0.000
Myotis_brandtii_MYF5_10034131 Myotis brandtii Myotis_brandtii_MYF5_10034131 I 0.000
Gfo_R007711 Geospiza fortis Gfo_R007711 I 0.000
RPRC009735 Rhodnius prolixus RPRC009735 I 0.000
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I 0.000
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I 0.000
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I 0.000
ENSXMAG00000003931 Xiphophorus maculatus ENSXMAG00000003931 I 0.000
MYOG Vicugna pacos ENSVPAG00000010566 I 0.000
MYF5 Vicugna pacos ENSVPAG00000001927 I 0.000
MYF6 Vicugna pacos ENSVPAG00000001926 I 0.000
MYF5 Tursiops truncatus ENSTTRG00000014691 I 0.000
MYF6 Tursiops truncatus ENSTTRG00000014689 I 0.000
MYOG Tursiops truncatus ENSTTRG00000000710 I 0.000
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.000
Aan_R003723 Calypte anna Aan_R003723 I 0.000
Aan_R006110 Calypte anna Aan_R006110 I 0.000
Gfo_R003967 Geospiza fortis Gfo_R003967 I 0.000
ENSP00000241651 Macaca fascicularis ENSP00000241651 I 0.000
ENSP00000228644 Macaca fascicularis ENSP00000228644 I 0.000
ENSP00000228641 Macaca fascicularis ENSP00000228641 I 0.000
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I 0.000
ENSBTAP00000007923-D1 Bos grunniens ENSBTAP00000007923-D1 I 0.000
Brh_R000054 Buceros rhinoceros Brh_R000054 I 0.000
Alligator_sinensis_CCG018754.1 Alligator sinensis Alligator_sinensis_CCG018754.1 I 0.000
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I 0.000
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I 0.000
Afo_R014067 Aptenodytes forsteri Afo_R014067 I 0.000
ENSTSYG00000009118 Tarsius syrichta ENSTSYG00000009118 I 0.000
myod1 Gasterosteus aculeatus ENSGACG00000017350 I 0.000
MYF6 Equus caballus ENSECAG00000018919 I 0.000
MYOG Equus caballus ENSECAG00000015955 I 0.000
Myf5 Dipodomys ordii ENSDORG00000015437 I 0.000
Myf6 Dipodomys ordii ENSDORG00000015435 I 0.000
MYF5 Dasypus novemcinctus ENSDNOG00000034747 I 0.000
MYOG Dasypus novemcinctus ENSDNOG00000032549 I 0.000
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I 0.000
myf6 Danio rerio ENSDARG00000029830 I 0.000
myog Danio rerio ENSDARG00000009438 I 0.000
myf5 Danio rerio ENSDARG00000007277 I 0.000
ENSCSAG00000014291 Chlorocebus sabaeus ENSCSAG00000014291 I 0.000
MYF5 Equus caballus ENSECAG00000020047 I 0.000
MYF5 Erinaceus europaeus ENSEEUG00000011612 I 0.000
myod1 Gasterosteus aculeatus ENSGACG00000008444 I 0.000
myog Gasterosteus aculeatus ENSGACG00000000349 I 0.000
MYF5 Felis catus ENSFCAG00000015011 I 0.000
MYF6 Felis catus ENSFCAG00000015010 I 0.000
MYOG Felis catus ENSFCAG00000013108 I 0.000
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I 0.000
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I 0.000
ENSFALG00000002471 Ficedula albicollis ENSFALG00000002471 I 0.000
MYF5 Echinops telfairi ENSETEG00000011255 I 0.000
MYOG Echinops telfairi ENSETEG00000003043 I 0.000
MYOG Erinaceus europaeus ENSEEUG00000011702 I 0.000
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I 0.000
ENSCSAG00000003889 Chlorocebus sabaeus ENSCSAG00000003889 I 0.000
MYOG Cavia porcellus ENSCPOG00000023459 I 0.000
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I 0.000
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I 0.000
ENSAMXG00000007437 Astyanax mexicanus ENSAMXG00000007437 I 0.000
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I 0.000
ENSAMXG00000000425 Astyanax mexicanus ENSAMXG00000000425 I 0.000
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I 0.000
ENSAMEG00000013193 Ailuropoda melanoleuca ENSAMEG00000013193 I 0.000
ENSAMEG00000012326 Ailuropoda melanoleuca ENSAMEG00000012326 I 0.000
MYF6 Anolis carolinensis ENSACAG00000022851 I 0.000
MYF5 Anolis carolinensis ENSACAG00000014431 I 0.000
MYOG Anolis carolinensis ENSACAG00000004818 I 0.000
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I 0.000
MYOG Bos taurus ENSBTAG00000006030 I 0.000
MYF5 Cavia porcellus ENSCPOG00000007766 I 0.000
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I 0.000
MYF5 Callithrix jacchus ENSCJAG00000019340 I 0.000
MYF6 Callithrix jacchus ENSCJAG00000019339 I 0.000
MYOG Callithrix jacchus ENSCJAG00000006443 I 0.000
MYF5 Choloepus hoffmanni ENSCHOG00000008319 I 0.000
MYOG Canis familiaris ENSCAFG00000010309 I 0.000
MYF5 Canis familiaris ENSCAFG00000005808 I 0.000
MYF6 Canis familiaris ENSCAFG00000005805 I 0.000
MYF5 Bos taurus ENSBTAG00000026972 I 0.000
MYF6 Bos taurus ENSBTAG00000014003 I 0.000
EFV52759 Trichinella spiralis EFV52759 I 0.000
myf6 Gasterosteus aculeatus ENSGACG00000020008 I 0.000
myog Oryzias latipes ENSORLG00000015906 I 0.000
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I 0.000
ENSOARG00000015159 Ovis aries ENSOARG00000015159 I 0.000
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I 0.000
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I 0.000
MYOG Ornithorhynchus anatinus ENSOANG00000002107 I 0.000
ENSNLEG00000018108 Nomascus leucogenys ENSNLEG00000018108 I 0.000
ENSNLEG00000005207 Nomascus leucogenys ENSNLEG00000005207 I 0.000
ENSNLEG00000005194 Nomascus leucogenys ENSNLEG00000005194 I 0.000
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I 0.000
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I 0.000
ENSMPUG00000004935 Mustela putorius furo ENSMPUG00000004935 I 0.000
MYOG Oryctolagus cuniculus ENSOCUG00000011548 I 0.000
MYF5 Oryctolagus cuniculus ENSOCUG00000025477 I 0.000
myod1 Oryzias latipes ENSORLG00000000694 I 0.000
MYOG Ochotona princeps ENSOPRG00000014753 I 0.000
MYF5 Ochotona princeps ENSOPRG00000009007 I 0.000
MYF6 Ochotona princeps ENSOPRG00000008999 I 0.000
ENSONIG00000019313 Oreochromis niloticus ENSONIG00000019313 I 0.000
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I 0.000
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I 0.000
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I 0.000
MYOG Otolemur garnettii ENSOGAG00000029573 I 0.000
MYF5 Otolemur garnettii ENSOGAG00000001039 I 0.000
MYF6 Otolemur garnettii ENSOGAG00000001038 I 0.000
MYF5 Monodelphis domestica ENSMODG00000020478 I 0.000
MYF6 Monodelphis domestica ENSMODG00000020477 I 0.000
MYOG Monodelphis domestica ENSMODG00000001009 I 0.000
ENSLOCG00000010722 Lepisosteus oculatus ENSLOCG00000010722 I 0.000
MYF6 Loxodonta africana ENSLAFG00000016476 I 0.000
MYF5 Loxodonta africana ENSLAFG00000016473 I 0.000
MYOG Loxodonta africana ENSLAFG00000013113 I 0.000
ENSLACG00000014874 Latimeria chalumnae ENSLACG00000014874 I 0.000
ENSLACG00000010731 Latimeria chalumnae ENSLACG00000010731 I 0.000
MYF6 Gorilla gorilla ENSGGOG00000004369 I 0.000
MYF5 Gorilla gorilla ENSGGOG00000004366 I 0.000
MYOG Gorilla gorilla ENSGGOG00000002115 I 0.000
MYF5 Gallus gallus ENSGALG00000028091 I 0.000
MYF6 Gallus gallus ENSGALG00000010936 I 0.000
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I 0.000
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I 0.000
MYF5 Macaca mulatta ENSMMUG00000011669 I 0.000
MYF6 Macaca mulatta ENSMMUG00000011667 I 0.000
ENSMMUG00000000064 Macaca mulatta ENSMMUG00000000064 I 0.000
MYOG Myotis lucifugus ENSMLUG00000016127 I 0.000
MYF5 Myotis lucifugus ENSMLUG00000004943 I 0.000
MYF6 Myotis lucifugus ENSMLUG00000004940 I 0.000
ENSMICG00000011211 Microcebus murinus ENSMICG00000011211 I 0.000
MYF6 Microcebus murinus ENSMICG00000004274 I 0.000
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I 0.000
MYOG Meleagris gallopavo ENSMGAG00000002212 I 0.000
ENSMEUG00000015462 Macropus eugenii ENSMEUG00000015462 I 0.000
MYOG Gallus gallus ENSGALG00000000172 I 0.000