ARID3B (Meleagris gallopavo)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSMGAG00000002805 T014606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN

NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.785 1.000
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN

NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.695 0.895
Arid3a
M00115_2.00
Mus musculus
NDATHADDN

NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.695 0.895
Arid3a
M01660_2.00
Mus musculus
NDATHAADN

NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.695 0.895
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN

NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.695 0.895
Arid3a
M02651_2.00
Mus musculus
ATYAAA

TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.695 0.895
ARID3A
M09766_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.695 0.895
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN

NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.675 0.488
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN

NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.657 0.756
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN

NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.644 0.791
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN

NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.644 0.791
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM

KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.644 0.791
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN

NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.644 0.791
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN

NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.621 0.686
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN

NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.508 0.419
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN

NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000002440 ARID/BRIGHT 224 310

Links

Other ARID/BRIGHT family TFs
Other Meleagris gallopavo TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fd102C Drosophila melanogaster FBgn0039937 D 0.000
SMU15004452 Schmidtea mediterranea SMU15004452 I 0.000
LLOJ003166 Lutzomyia longipalpis LLOJ003166 I 0.000
LLOJ007413 Lutzomyia longipalpis LLOJ007413 I 0.000
PPAI000826 Phlebotomus papatasi PPAI000826 I 0.000
ACAC_0000772401 Angiostrongylus cantonensis ACAC_0000772401 I 0.000
ACOC_0000013301 Angiostrongylus costaricensis ACOC_0000013301 I 0.000
ANCCAN_30535 Ancylostoma caninum ANCCAN_30535 I 0.000
ANCCEY_07256 Ancylostoma ceylanicum ANCCEY_07256 I 0.000
ASU_00906 Ascaris suum ASU_00906 I 0.000
BTMF_0001614201 Brugia timori BTMF_0001614201 I 0.000
BXY_1193200 Bursaphelenchus xylophilus BXY_1193200 I 0.000
CGOC_0000329701 Cylicostephanus goldi CGOC_0000329701 I 0.000
D915_07563 Fasciola hepatica D915_07563 I 0.000
D917_06283 Trichinella nativa D917_06283 I 0.000
D918_04073 Trichuris suis D918_04073 I 0.000
BGLB003447 Biomphalaria glabrata BGLB003447 I 0.000
ASTEI06209 Anopheles stephensi ASTEI06209 I 0.000
ASIS005525 Anopheles sinensis ASIS005525 I 0.000
XP_002159677.1 Hydra magnipapillata XP_002159677.1 I 0.000
AALB006646 Anopheles albimanus AALB006646 I 0.000
AARA001108 Anopheles arabiensis AARA001108 I 0.000
AATE003062 Anopheles atroparvus AATE003062 I 0.000
ACHR005020 Anopheles christyi ACHR005020 I 0.000
ACUA020854 Anopheles culicifacies ACUA020854 I 0.000
ADIR000975 Anopheles dirus ADIR000975 I 0.000
AEPI005796 Anopheles epiroticus AEPI005796 I 0.000
AFAF018179 Anopheles farauti AFAF018179 I 0.000
AFUN011568 Anopheles funestus AFUN011568 I 0.000
AMAM011474 Anopheles maculatus AMAM011474 I 0.000
AMEC012184 Anopheles melas AMEC012184 I 0.000
AMEM007373 Anopheles merus AMEM007373 I 0.000
AMIN002134 Anopheles minimus AMIN002134 I 0.000
AQUA008315 Anopheles quadriannulatus AQUA008315 I 0.000
DICVIV_08747 Dictyocaulus viviparus DICVIV_08747 I 0.000
DME_0000296101 Dracunculus medinensis DME_0000296101 I 0.000
ECANG7_07537 Echinococcus canadensis ECANG7_07537 I 0.000
L898_g16488 Steinernema monticolum L898_g16488 I 0.000
NBR_0000095001 Nippostrongylus brasiliensis NBR_0000095001 I 0.000
nDi.2.2.2.g05283 Dirofilaria immitis nDi.2.2.2.g05283 I 0.000
NECAME_04384 Necator americanus NECAME_04384 I 0.000
nOo.2.0.1.g07936 Onchocerca ochengi nOo.2.0.1.g07936 I 0.000
OESDEN_02306 Oesophagostomum dentatum OESDEN_02306 I 0.000
SBAD_0000682701 Soboliphyme baturini SBAD_0000682701 I 0.000
SVUK_0000095001 Strongylus vulgaris SVUK_0000095001 I 0.000
TASK_0000135801 Taenia asiatica TASK_0000135801 I 0.000
TCLT_0000158601 Thelazia callipaeda TCLT_0000158601 I 0.000
TCNE_0000717001 Toxocara canis TCNE_0000717001 I 0.000
TMUE_s0045003300 Trichuris muris TMUE_s0045003300 I 0.000
TsM_000027600 Taenia solium TsM_000027600 I 0.000
TTAC_0000212301 Hydatigera taeniaeformis TTAC_0000212301 I 0.000
TTAC_0000750901 Hydatigera taeniaeformis TTAC_0000750901 I 0.000
L893_g32272 Steinernema glaseri L893_g32272 I 0.000
L892_g5229 Steinernema scapterisci L892_g5229 I 0.000
ECANG7_08418 Echinococcus canadensis ECANG7_08418 I 0.000
EEL_0000313101 Elaeophora elaphi EEL_0000313101 I 0.000
EmuJ_001141600 Echinococcus multilocularis EmuJ_001141600 I 0.000
GPUH_0002128801 Gongylonema pulchrum GPUH_0002128801 I 0.000
HCOI02176800 Haemonchus contortus HCOI02176800 I 0.000
HDID_0000500401 Hymenolepis diminuta HDID_0000500401 I 0.000
HDID_0000955901 Hymenolepis diminuta HDID_0000955901 I 0.000
HmN_000125600 Hymenolepis microstoma HmN_000125600 I 0.000
HmN_000572200 Hymenolepis microstoma HmN_000572200 I 0.000
HNAJ_0000218001 Hymenolepis nana HNAJ_0000218001 I 0.000
HNAJ_0001261001 Hymenolepis nana HNAJ_0001261001 I 0.000
HPBE_0001940301 Heligmosomoides bakeri HPBE_0001940301 I 0.000
HPLM_0001940801 Haemonchus placei HPLM_0001940801 I 0.000
L596_g8980 Steinernema carpocapsae L596_g8980 I 0.000
L889_g23699 Steinernema feltiae L889_g23699 I 0.000
TTRE_0000002201 Trichuris trichiura TTRE_0000002201 I 0.000
WUBG_10187 Wuchereria bancrofti WUBG_10187 I 0.000
GA10799 Drosophila pseudoobscura FBgn0070855 I 0.000
GF10343 Drosophila ananassae FBgn0087384 I 0.000
GG16435 Drosophila erecta FBgn0108666 I 0.000
GH24005 Drosophila grimshawi FBgn0131461 I 0.000
GI14084 Drosophila mojavensis FBgn0136838 I 0.000
GL15611 Drosophila persimilis FBgn0153215 I 0.000
GM26767 Drosophila sechellia FBgn0181620 I 0.000
GJ15974 Drosophila virilis FBgn0203160 I 0.000
GK13662 Drosophila willistoni FBgn0215670 I 0.000
GE14501 Drosophila yakuba FBgn0232105 I 0.000
GB50374 Apis mellifera GB50374 I 0.000
HelroG146879 Helobdella robusta HelroG146879 I 0.000
HelroG84905 Helobdella robusta HelroG84905 I 0.000
DAPPUDRAFT_50302 Daphnia pulex DAPPUDRAFT_50302 I 0.000
CRE23967 Caenorhabditis remanei CRE23967 I 0.000
CPIJ009525 Culex quinquefasciatus CPIJ009525 I 0.000
AAEL000236 Aedes aegypti AAEL000236 I 0.000
AAEL007736 Aedes aegypti AAEL007736 I 0.000
AAEL013354 Aedes aegypti AAEL013354 I 0.000
ACEP16720 Atta cephalotes ACEP16720 I 0.000
ACYPI002885 Acyrthosiphon pisum ACYPI002885 I 0.000
AGAP000069 Anopheles gambiae AGAP000069 I 0.000
BGIBMGA001488 Bombyx mori BGIBMGA001488 I 0.000
CapteG111555 Capitella teleta CapteG111555 I 0.000
CapteG82802 Capitella teleta CapteG82802 I 0.000
CBG12232 Caenorhabditis briggsae CBG12232 I 0.000
CBN31271 Caenorhabditis brenneri CBN31271 I 0.000
CGI_10003726 Crassostrea gigas CGI_10003726 I 0.000
CpipJ_CPIJ009525 Culex pipiens CpipJ_CPIJ009525 I 0.000
HMEL012130 Heliconius melpomene HMEL012130 I 0.000
ISCW003951 Ixodes scapularis ISCW003951 I 0.000
KGM_06490 Danaus plexippus KGM_06490 I 0.000
LCUP005975 Lucilia cuprina LCUP005975 I 0.000
CLEC001579 Cimex lectularius CLEC001579 I 0.000
Sakowv30023336m.g Saccoglossus kowalevskii Sakowv30023336m.g I 0.000
Sakowv30023329m.g Saccoglossus kowalevskii Sakowv30023329m.g I 0.000
Ocbimv22038677m.g Octopus bimaculoides Ocbimv22038677m.g I 0.000
e_gw.6.414.1 Branchiostoma floridae e_gw.6.414.1 I 0.000
fkh-10 Caenorhabditis elegans WBGene00001442 I 0.000
WBGene00238063 Onchocerca volvulus WBGene00238063 I 0.000
YQE_09099 Dendroctonus ponderosae YQE_09099 I 0.000
Cflo_07366--XP_001121752.1_APIME Camponotus floridanus Cflo_07366--XP_001121752.1_APIME I 0.000
Hsal_00505--XP_001121752.1_APIME Harpegnathos saltator Hsal_00505--XP_001121752.1_APIME I 0.000
TC004761 Tribolium castaneum TC004761 I 0.000
SMAR012448 Strigamia maritima SMAR012448 I 0.000
LDEC001528 Leptinotarsa decemlineata LDEC001528 I 0.000
LotgiG69928 Lottia gigantea LotgiG69928 I 0.000
LotgiG79770 Lottia gigantea LotgiG79770 I 0.000
LotgiG79781 Lottia gigantea LotgiG79781 I 0.000
MESCA005623 Megaselia scalaris MESCA005623 I 0.000
NEMVEDRAFT_v1g125256 Nematostella vectensis NEMVEDRAFT_v1g125256 I 0.000
NEMVEDRAFT_v1g39596 Nematostella vectensis NEMVEDRAFT_v1g39596 I 0.000
NEMVEDRAFT_v1g59063 Nematostella vectensis NEMVEDRAFT_v1g59063 I 0.000
NV18839 Nasonia vitripennis NV18839 I 0.000
PHUM244390 Pediculus humanus PHUM244390 I 0.000
SINV17382 Solenopsis invicta SINV17382 I 0.000
tetur01g09690 Tetranychus urticae tetur01g09690 I 0.000
Pvit_09831 Pogona vitticeps Pvit_09831 N 0.000
SMRZ_0001178901 Schistosoma margrebowiei SMRZ_0001178901 N 0.000
CapteG40198 Capitella teleta CapteG40198 N 0.000
C_00890 Schistosoma haematobium C_00890 N 0.000
ENSXMAG00000012768 Xiphophorus maculatus ENSXMAG00000012768 N 0.000
ENSPFOG00000001440 Poecilia formosa ENSPFOG00000001440 N 0.000
foxq2 Oryzias latipes ENSORLG00000004973 N 0.000
ENSLACG00000010819 Latimeria chalumnae ENSLACG00000010819 N 0.000
foxq2 Danio rerio ENSDARG00000071394 N 0.000
Ogr12164 Ophisaurus gracilis Ogr12164 N 0.000
Alligator_sinensis_CCG003246.1 Alligator sinensis Alligator_sinensis_CCG003246.1 N 0.000
Cmyd_10015602 Chelonia mydas Cmyd_10015602 N 0.000
CJA06474 Caenorhabditis japonica CJA06474 N 0.000