ENSORLG00000011620 (Oryzias latipes)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSORLG00000011620 T014695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.706 0.779
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.706 0.779
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.630 0.674
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.590 0.674
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.590 0.674
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.590 0.674
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.590 0.674
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.511 0.570
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014562 ARID/BRIGHT 52 138

Links

Other ARID/BRIGHT family TFs
Other Oryzias latipes TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Brh_R001925 Buceros rhinoceros Brh_R001925 N 0.000
ZNF827 Callithrix jacchus ENSCJAG00000002484 N 0.000
ZNF827 Dasypus novemcinctus ENSDNOG00000004889 N 0.000
ZNF827 Equus caballus ENSECAG00000021655 N 0.000
ZNF827 Gallus gallus ENSGALG00000009982 N 0.000
ZNF827 Homo sapiens ENSG00000151612 N 0.000
ZNF827 Macaca mulatta ENSMMUG00000005380 N 0.000
ZNF827 Meleagris gallopavo ENSMGAG00000003772 N 0.000
ZNF827 Procavia capensis ENSPCAG00000004783 N 0.000
ZNF827 Tupaia belangeri ENSTBEG00000017519 N 0.000