ENSPPYG00000012072 (Pongo abelii)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSPPYG00000012072 T014735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.785 1.000
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.785 1.000
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.649 0.647
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.632 0.753
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.632 0.753
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.632 0.753
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.632 0.753
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.493 0.588
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000013460 ARID/BRIGHT 92 177

Links

Other ARID/BRIGHT family TFs
Other Pongo abelii TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL008129 Aedes aegypti AAEL008129 I 0.000
AALB007267 Anopheles albimanus AALB007267 I 0.000
AATE014166 Anopheles atroparvus AATE014166 I 0.000
ACEP14601 Atta cephalotes ACEP14601 I 0.000
ACHR009540 Anopheles christyi ACHR009540 I 0.000
ACYPI005120 Acyrthosiphon pisum ACYPI005120 I 0.000
ADIR003260 Anopheles dirus ADIR003260 I 0.000
AEPI004442 Anopheles epiroticus AEPI004442 I 0.000
AFAF013763 Anopheles farauti AFAF013763 I 0.000
AGAP003965 Anopheles gambiae AGAP003965 I 0.000
AMIN014031 Anopheles minimus AMIN014031 I 0.000
CPIJ007267 Culex quinquefasciatus CPIJ007267 I 0.000
CpipJ_CPIJ007267 Culex pipiens CpipJ_CPIJ007267 I 0.000
dys Drosophila melanogaster FBgn0039411 D 0.000
GA16931 Drosophila pseudoobscura FBgn0076945 I 0.000
GF16506 Drosophila ananassae FBgn0093527 I 0.000
GG12197 Drosophila erecta FBgn0104489 I 0.000
GH18137 Drosophila grimshawi FBgn0125605 I 0.000
GI22899 Drosophila mojavensis FBgn0145626 I 0.000
GL22009 Drosophila persimilis FBgn0159602 I 0.000
GM10194 Drosophila sechellia FBgn0165145 I 0.000
GD18145 Drosophila simulans FBgn0189686 I 0.000
GJ23312 Drosophila virilis FBgn0210413 I 0.000
GK12795 Drosophila willistoni FBgn0214804 I 0.000
GE10639 Drosophila yakuba FBgn0228491 I 0.000
ISCW012136 Ixodes scapularis ISCW012136 I 0.000
L798_08628 Zootermopsis nevadensis L798_08628 I 0.000
LCUP006062 Lucilia cuprina LCUP006062 I 0.000
LDEC017472 Leptinotarsa decemlineata LDEC017472 I 0.000
MDOA011266 Musca domestica MDOA011266 I 0.000
PHUM109080 Pediculus humanus PHUM109080 I 0.000
PPAI005419 Phlebotomus papatasi PPAI005419 I 0.000
RPRC003819 Rhodnius prolixus RPRC003819 I 0.000
SMAR010807 Strigamia maritima SMAR010807 I 0.000
TC013566 Tribolium castaneum TC013566 I 0.000
YQE_09148 Dendroctonus ponderosae YQE_09148 I 0.000