CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG76486
(
Helobdella robusta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
HelroG76486
T015064_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN
NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.471
0.518
Arid3a
M00115_2.00
Mus musculus
NDATHADDN
NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.471
0.518
Arid3a
M01660_2.00
Mus musculus
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.471
0.518
Arid3a
M02651_2.00
Mus musculus
ATYAAA
TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.471
0.518
ARID3A
M09766_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.471
0.518
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN
NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.471
0.506
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.463
0.494
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.463
0.494
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.463
0.494
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.463
0.494
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.463
0.459
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP76486
ARID/BRIGHT
17
102
ERTPFLEKLFTFMQNRGTPITSLPSICKQVIDLFSLYFLVKEMGGMDELNKSKKWRDISSNMGLGSSSSAGFTLKKNYAKYLYPFE
Links
Other
ARID/BRIGHT
family TFs
Other
Helobdella robusta
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy