CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SINV22144
(
Solenopsis invicta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
SINV22144
T015605_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.495
0.512
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN
NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.437
0.477
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN
NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.437
0.477
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV22144-PA
ARID/BRIGHT
67
189
EEKKFITDVQSFMNSRGTPVGKMPLLGYRQSQYLRAKTQQGFLLVKSKSHSSRVYDPNDPFFFSSAVDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Solenopsis invicta
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy