Solyc04g025930.1 (Solanum lycopersicum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 Solyc04g025930.1 T015636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g025930.1.1 ARID/BRIGHT 80 139

Links

Other ARID/BRIGHT family TFs
Other Solanum lycopersicum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.511
SapurV1A.2929s0030 Salix purpurea SapurV1A.2929s0030 N 0.511
SapurV1A.0216s0430 Salix purpurea SapurV1A.0216s0430 N 0.511
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.509
OFLC_0000209301 Onchocerca flexuosa OFLC_0000209301 N 0.492
maker-nMf.1.1.scaf01260-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf01260-augustus-gene-0.7 N 0.490
ACRE_008210 Acremonium chrysogenum ACRE_008210 N 0.490
Traes_2AS_40ED2C7BC Triticum aestivum Traes_2AS_40ED2C7BC N 0.486
Bra015737 Brassica rapa Bra015737 N 0.486
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.480
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N 0.479
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.479
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N 0.479
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N 0.479
OS06G0622300 Oryza sativa OS06G0622300 I 0.479
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.478
PYU1_G003210 Pythium ultimum PYU1_G003210 N 0.478
BOTBODRAFT_44712 Botryobasidium botryosum BOTBODRAFT_44712 N 0.470
CFIO01_08658 Colletotrichum fioriniae CFIO01_08658 N 0.465
F775_22367 Aegilops tauschii F775_22367 N 0.456
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N 0.456
TC007519 Tribolium castaneum TC007519 N 0.447
F775_31416 Aegilops tauschii F775_31416 N 0.441
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N 0.436
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.433
GK21672 Drosophila willistoni FBgn0223657 N 0.433
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.433
ASIM_0001638701 Anisakis simplex ASIM_0001638701 N 0.431
e_gw1.4.238.1 Coccomyxa subellipsoidea C169 e_gw1.4.238.1 N 0.430
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N 0.428
Genemark.397_g Heterobasidion annosum Genemark.397_g N 0.428
cassava32082.m1 Manihot esculenta cassava32082.m1 N 0.427
cassava33852.m1 Manihot esculenta cassava33852.m1 N 0.427
Solyc12g038740.1 Solanum lycopersicum Solyc12g038740.1 N 0.426