TCM_034809 (Theobroma cacao)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 TCM_034809 T015686_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.681 0.812
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.672 0.788
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY15870 ARID/BRIGHT 146 231
EOY15871 ARID/BRIGHT 146 231
EOY15872 ARID/BRIGHT 146 231
EOY15873 ARID/BRIGHT 146 231
EOY15874 ARID/BRIGHT 146 231
EOY15875 ARID/BRIGHT 146 231
EOY15876 ARID/BRIGHT 146 231
EOY15877 ARID/BRIGHT 146 231
EOY15878 ARID/BRIGHT 146 231

Links

Other ARID/BRIGHT family TFs
Other Theobroma cacao TFs

Invalid Input OrderBy

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action