Cmyd_10012612 (Chelonia mydas)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Cmyd_10012612 T015888_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.457 0.402
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.457 0.390
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10012612 ARID/BRIGHT 15 97

Links

Other ARID/BRIGHT family TFs
Other Chelonia mydas TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004972.1 Alligator sinensis Alligator_sinensis_CCG004972.1 I 0.737
Arid2 Mus musculus ENSMUSG00000033237 I 0.721
ENSXMAG00000008966 Xiphophorus maculatus ENSXMAG00000008966 I 0.587
TTHERM_00243900 Tetrahymena thermophila TTHERM_00243900 D 0.457
GSPATT00004674001 Paramecium tetraurelia GSPATT00004674001 D 0.457
Sakowv30024151m.g Saccoglossus kowalevskii Sakowv30024151m.g N 0.453
ARID2 Choloepus hoffmanni ENSCHOG00000013380 N 0.446
ARID2 Erinaceus europaeus ENSEEUG00000001577 N 0.446
Contig1044.0.g66 Oxytricha trifallax Contig1044.0.g66 I 0.444
Cla007529 Citrullus lanatus Cla007529 I 0.439
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I 0.438
Cla016376 Citrullus lanatus Cla016376 I 0.437
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.428