CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000026200-D1
(
Bos grunniens
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
ENSBTAP00000026200-D1
T015895_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN
NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.575
0.852
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN
NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.575
0.852
arid6
M01657_2.00
Danio rerio
NNRWATYN
NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.439
0.511
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000026200-D1
ARID/BRIGHT
53
142
EEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATPAPWQHALFFPRLVLPY
Links
Other
ARID/BRIGHT
family TFs
Other
Bos grunniens
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008932
Ailuropoda melanoleuca
ENSAMEG00000008932
I
0.575
ARID5A
Otolemur garnettii
ENSOGAG00000004116
I
0.575
ENSPANG00000012565
Papio anubis
ENSPANG00000012565
I
0.575
ARID5A
Procavia capensis
ENSPCAG00000006363
I
0.575
ENSMPUG00000008907
Mustela putorius furo
ENSMPUG00000008907
I
0.575
ARID5A
Monodelphis domestica
ENSMODG00000008611
I
0.575
ARID5A
Loxodonta africana
ENSLAFG00000009162
I
0.575
ENSMEUG00000014406
Macropus eugenii
ENSMEUG00000014406
I
0.575
ARID5A
Myotis lucifugus
ENSMLUG00000003208
I
0.575
ENSPPYG00000012072
Pongo abelii
ENSPPYG00000012072
I
0.575
ENSPSIG00000014127
Pelodiscus sinensis
ENSPSIG00000014127
I
0.575
ARID5A
Tursiops truncatus
ENSTTRG00000007812
I
0.575
Cmyd_10001620
Chelonia mydas
Cmyd_10001620
I
0.575
Myotis_brandtii_ARID5A_10013684
Myotis brandtii
Myotis_brandtii_ARID5A_10013684
I
0.575
ARID5A
Sus scrofa
ENSSSCG00000008123
I
0.575
ENSSHAG00000018209
Sarcophilus harrisii
ENSSHAG00000018209
I
0.575
ARID5A
Pan troglodytes
ENSPTRG00000012234
I
0.575
ARID5A
Pteropus vampyrus
ENSPVAG00000009400
I
0.575
Arid5a
Rattus norvegicus
ENSRNOG00000015382
D
0.575
ARID5A
Gorilla gorilla
ENSGGOG00000017068
I
0.575
Arid5a
Mus musculus
ENSMUSG00000037447
D
0.575
ARID5A
Dasypus novemcinctus
ENSDNOG00000035690
I
0.575
ARID5A
Felis catus
ENSFCAG00000024950
I
0.575
ARID5A
Erinaceus europaeus
ENSEEUG00000008247
I
0.575
ARID5A
Equus caballus
ENSECAG00000023667
I
0.575
Arid5a
Dipodomys ordii
ENSDORG00000002540
I
0.575
ARID5A
Canis familiaris
ENSCAFG00000006546
I
0.575
ARID5A
Homo sapiens
ENSG00000196843
I
0.575
ENSCSAG00000017355
Chlorocebus sabaeus
ENSCSAG00000017355
I
0.575
ARID5A
Callithrix jacchus
ENSCJAG00000007759
I
0.575
ARID5A
Cavia porcellus
ENSCPOG00000026444
I
0.575
ARID5A
Bos taurus
ENSBTAG00000014090
I
0.575
ENSSTOG00000019546
Ictidomys tridecemlineatus
ENSSTOG00000019546
I
0.566
Alligator_sinensis_CCG013281.1
Alligator sinensis
Alligator_sinensis_CCG013281.1
I
0.561
Ogr03010
Ophisaurus gracilis
Ogr03010
I
0.561
ENSLACG00000014124
Latimeria chalumnae
ENSLACG00000014124
I
0.559
ARID5A
Ochotona princeps
ENSOPRG00000015571
I
0.535
ENSLOCG00000015055
Lepisosteus oculatus
ENSLOCG00000015055
I
0.534
ENSAMXG00000005409
Astyanax mexicanus
ENSAMXG00000005409
I
0.534
arid5a
Danio rerio
ENSDARG00000077120
I
0.501
ENSFALG00000000299
Ficedula albicollis
ENSFALG00000000299
I
0.498
ENSTGUG00000015609
Taeniopygia guttata
ENSTGUG00000015609
I
0.498
ENSGALG00000027335
Gallus gallus
ENSGALG00000027335
I
0.498
ENSPFOG00000012795
Poecilia formosa
ENSPFOG00000012795
I
0.496
ENSONIG00000010644
Oreochromis niloticus
ENSONIG00000010644
I
0.496
ENSTNIG00000006278
Tetraodon nigroviridis
ENSTNIG00000006278
I
0.496
ENSXMAG00000001883
Xiphophorus maculatus
ENSXMAG00000001883
I
0.496
ENSORLG00000011620
Oryzias latipes
ENSORLG00000011620
I
0.496
ENSPMAG00000002699
Petromyzon marinus
ENSPMAG00000002699
I
0.478
ENSTRUG00000001547
Takifugu rubripes
ENSTRUG00000001547
I
0.477
ARID5A
Macaca mulatta
ENSMMUG00000030744
I
0.475
ENSORLG00000018351
Oryzias latipes
ENSORLG00000018351
I
0.455
ENSGMOG00000008075
Gadus morhua
ENSGMOG00000008075
I
0.453
ENSXMAG00000018209
Xiphophorus maculatus
ENSXMAG00000018209
I
0.447
ENSAMXG00000012004
Astyanax mexicanus
ENSAMXG00000012004
I
0.447
arid5b
Tetraodon nigroviridis
ENSTNIG00000007478
I
0.447
arid5b
Takifugu rubripes
ENSTRUG00000010671
I
0.447
ENSPFOG00000012334
Poecilia formosa
ENSPFOG00000012334
I
0.447
ENSONIG00000000889
Oreochromis niloticus
ENSONIG00000000889
I
0.447
arid5b
Gasterosteus aculeatus
ENSGACG00000010603
I
0.447
ENSLOCG00000006809
Lepisosteus oculatus
ENSLOCG00000006809
I
0.447
arid5b
Danio rerio
ENSDARG00000037196
I
0.447
ENSORLG00000004756
Oryzias latipes
ENSORLG00000004756
I
0.447
ENSGMOG00000004984
Gadus morhua
ENSGMOG00000004984
I
0.447
arid6
Danio rerio
ENSDARG00000069988
D
0.439
ENSLOCG00000005151
Lepisosteus oculatus
ENSLOCG00000005151
I
0.439
ENSPFOG00000022560
Poecilia formosa
ENSPFOG00000022560
I
0.428