Hsal_01506--XP_395512.3_APIME (Harpegnathos saltator)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Hsal_01506--XP_395512.3_APIME T015908_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN

NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.553 0.523
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN

NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.553 0.523
Arid5b
M01661_2.00
Mus musculus
NDATWHNN

NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.530 0.488
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.530 0.488
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD

HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.530 0.488
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB

VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.530 0.488
arid6
M01657_2.00
Danio rerio
NNRWATYN

NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.526 0.558
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN

NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.423 0.547
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_01506--XP_395512.3_APIME ARID/BRIGHT 226 312

Links

Other ARID/BRIGHT family TFs
Other Harpegnathos saltator TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH41216 Xenopus laevis AAH41216 N 0.000
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.000
ACEP21543 Atta cephalotes ACEP21543 N 0.000
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.000
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.000
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.000
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.000
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.000
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.000
ASU_02248 Ascaris suum ASU_02248 N 0.000
Bm7076 Brugia malayi Bm7076 N 0.000
CBG09815 Caenorhabditis briggsae CBG09815 N 0.000
CBN09141 Caenorhabditis brenneri CBN09141 N 0.000
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.000
CJA12494 Caenorhabditis japonica CJA12494 N 0.000
CRE25200 Caenorhabditis remanei CRE25200 N 0.000
D918_01415 Trichuris suis D918_01415 N 0.000
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.000
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.000
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.000
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.000
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.000
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.000
GB50847 Apis mellifera GB50847 N 0.000
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.000
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.000
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.000
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.000
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.000
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.000
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.000
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.000
L798_00593 Zootermopsis nevadensis L798_00593 N 0.000
L889_g3706 Steinernema feltiae L889_g3706 N 0.000
L898_g375 Steinernema monticolum L898_g375 N 0.000
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.000
LOAG_01279 Loa loa LOAG_01279 N 0.000
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.000
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.000
Minc14081 Meloidogyne incognita Minc14081 N 0.000
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.000
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.000
NECAME_16117 Necator americanus NECAME_16117 N 0.000
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.000
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.000
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.000
NV11999 Nasonia vitripennis NV11999 N 0.000
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.000
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.000
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.000
PEQ_0000805501 Parascaris equorum PEQ_0000805501 N 0.000
PPA02543 Pristionchus pacificus PPA02543 N 0.000
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.000
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.000
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.000
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.000
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.000
TC007745 Tribolium castaneum TC007745 N 0.000
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.000
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.000
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.000
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.000
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.000
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.000
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.000