cassava14944.m1 (Manihot esculenta)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 cassava14944.m1 T015952_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14944.m1 ARID/BRIGHT 100 188

Links

Other ARID/BRIGHT family TFs
Other Manihot esculenta TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011218 Ricinus communis 30190.m011218 N 0.739
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.696
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.688
TCM_016246 Theobroma cacao TCM_016246 N 0.674
PK05702.1 Cannabis sativa PK05702.1 N 0.669
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.666
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.663
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.630
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.630
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.622
MDP0000287313 Malus domestica MDP0000287313 N 0.617
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.608
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.608
Cla011637 Citrullus lanatus Cla011637 N 0.605
Pm023825 Prunus mume Pm023825 N 0.603
MDP0000162827 Malus domestica MDP0000162827 N 0.602
MDP0000286412 Malus domestica MDP0000286412 N 0.602
MDP0000158904 Malus domestica MDP0000158904 N 0.602
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.601
Bo9g029100 Brassica oleracea Bo9g029100 N 0.587
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.587
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.559
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.557
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.544
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.544
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.504
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.497
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.495
mgf018831m Mimulus guttatus mgf018831m N 0.494
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.469
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.469
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.469
Cla007529 Citrullus lanatus Cla007529 I 0.446
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.435
chr1.CM0121.100.nd Lotus japonicus chr1.CM0121.100.nd N 0.426
chr1.CM0121.260.nc Lotus japonicus chr1.CM0121.260.nc N 0.426