CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_chr_80065
(
Mycosphaerella graminicola
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
estExt_Genewise1Plus.C_chr_80065
T015990_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01238
M01669_2.00
Neurospora crassa
NYATNNNN
NNNNATRN
PBM
Weirauch et al.(2014)
pTH8942
0.582
0.747
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_chr_80065
ARID/BRIGHT
137
224
VNNDYLDQLAKFHKQNGHNLNRFPSVDKRPLDLYRLKKTVERKGGFDLVCKSKRWAEVGRDLGYSGKIMSSLSTSLKNSYQKWLFPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Mycosphaerella graminicola
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AATE012213
Anopheles atroparvus
AATE012213
I
0.000
ACEP21757
Atta cephalotes
ACEP21757
I
0.000
ACUA005738
Anopheles culicifacies
ACUA005738
I
0.000
ACYPI008619
Acyrthosiphon pisum
ACYPI008619
I
0.000
ADAC004790
Anopheles darlingi
ADAC004790
I
0.000
AFAF008430
Anopheles farauti
AFAF008430
I
0.000
AFUN002458
Anopheles funestus
AFUN002458
I
0.000
AGAP004331
Anopheles gambiae
AGAP004331
I
0.000
AMAM014008
Anopheles maculatus
AMAM014008
I
0.000
BGLB012448
Biomphalaria glabrata
BGLB012448
I
0.000
CapteG4919
Capitella teleta
CapteG4919
I
0.000
CGI_10011936
Crassostrea gigas
CGI_10011936
I
0.000
CLEC000700
Cimex lectularius
CLEC000700
I
0.000
CPIJ006366
Culex quinquefasciatus
CPIJ006366
I
0.000
CpipJ_CPIJ006366
Culex pipiens
CpipJ_CPIJ006366
I
0.000
GA20515
Drosophila pseudoobscura
FBgn0080509
I
0.000
GB43258
Apis mellifera
GB43258
I
0.000
GD20175
Drosophila simulans
FBgn0191653
I
0.000
GE25205
Drosophila yakuba
FBgn0242289
I
0.000
GF18117
Drosophila ananassae
FBgn0095135
I
0.000
GG16477
Drosophila erecta
FBgn0108708
I
0.000
GH19229
Drosophila grimshawi
FBgn0126695
I
0.000
GI24263
Drosophila mojavensis
FBgn0146986
I
0.000
GK11495
Drosophila willistoni
FBgn0213506
I
0.000
gl
Drosophila virilis
FBgn0015211
I
0.000
gl
Drosophila melanogaster
FBgn0004618
D
0.000
GL23194
Drosophila persimilis
FBgn0160784
I
0.000
GM18708
Drosophila sechellia
FBgn0173613
I
0.000
HelroG86767
Helobdella robusta
HelroG86767
I
0.000
HMEL016965
Heliconius melpomene
HMEL016965
I
0.000
ISCW013678
Ixodes scapularis
ISCW013678
I
0.000
KGM_06609
Danaus plexippus
KGM_06609
I
0.000
LCUP002895
Lucilia cuprina
LCUP002895
I
0.000
LotgiG155751
Lottia gigantea
LotgiG155751
I
0.000
MDOA012721
Musca domestica
MDOA012721
I
0.000
ML19062a
Mnemiopsis leidyi
ML19062a
I
0.000
NV10631
Nasonia vitripennis
NV10631
I
0.000
Ocbimv22030200m.g
Octopus bimaculoides
Ocbimv22030200m.g
I
0.000
PHUM530160
Pediculus humanus
PHUM530160
I
0.000
PXEA_0003135501
Protopolystoma xenopodis
PXEA_0003135501
I
0.000
Sakowv30008117m.g
Saccoglossus kowalevskii
Sakowv30008117m.g
I
0.000
SMAR000758
Strigamia maritima
SMAR000758
I
0.000
SPU_007599
Strongylocentrotus purpuratus
SPU_007599
I
0.000
TC012565
Tribolium castaneum
TC012565
I
0.000
tetur07g01570
Tetranychus urticae
tetur07g01570
I
0.000
YQE_07567
Dendroctonus ponderosae
YQE_07567
I
0.000