CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_2000567
(
Mycosphaerella fijiensis
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
fgenesh1_pg.C_scaffold_2000567
T016004_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01238
M01669_2.00
Neurospora crassa
NYATNNNN
NNNNATRN
PBM
Weirauch et al.(2014)
pTH8942
0.582
0.736
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_2000567
ARID/BRIGHT
170
257
INNDYLDQLAKFHKQNGHNLNRFPSVDKRPLDLYRLKKTVERKGGFEQVCKGKRWAEVGRDLGYSGKIMSSLSTSLKNSYQKWLLPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Mycosphaerella fijiensis
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy