gw1.8.90.1 (Volvox carteri)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 gw1.8.90.1 T016024_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.8.90.1 ARID/BRIGHT 88 147

Links

Other ARID/BRIGHT family TFs
Other Volvox carteri TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MCINX010724 Melitaea cinxia MCINX010724 N 0.529
TELCIR_22728 Teladorsagia circumcincta TELCIR_22728 N 0.523
Cflo_11029--XP_001120115.1_APIME Camponotus floridanus Cflo_11029--XP_001120115.1_APIME N 0.515
ACEP25970 Atta cephalotes ACEP25970 N 0.515
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N 0.515
Lus10008531.g Linum usitatissimum Lus10008531.g N 0.506
HPBE_0000220801 Heligmosomoides bakeri HPBE_0000220801 N 0.497
ANCCAN_16550 Ancylostoma caninum ANCCAN_16550 N 0.494
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N 0.494
NECAME_01264 Necator americanus NECAME_01264 N 0.494
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N 0.485
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N 0.485
CapteG108943 Capitella teleta CapteG108943 N 0.485
PHACADRAFT_251691 Phanerochaete carnosa PHACADRAFT_251691 N 0.482
SapurV1A.0216s0430 Salix purpurea SapurV1A.0216s0430 N 0.475
SapurV1A.2929s0030 Salix purpurea SapurV1A.2929s0030 N 0.475
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N 0.471
YQE_11989 Dendroctonus ponderosae YQE_11989 N 0.471
BOTBODRAFT_182015 Botryobasidium botryosum BOTBODRAFT_182015 N 0.469
NBR_0000433801 Nippostrongylus brasiliensis NBR_0000433801 N 0.466
SPU_009801 Strongylocentrotus purpuratus SPU_009801 N 0.457
maker-nMf.1.1.scaf01260-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf01260-augustus-gene-0.7 N 0.450
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.443
Pvit_06674 Pogona vitticeps Pvit_06674 N 0.441
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N 0.438
Bo4g012540 Brassica oleracea Bo4g012540 N 0.437
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.435
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.435
ARID5A Sorex araneus ENSSARG00000003004 I 0.433
ARID5A Microcebus murinus ENSMICG00000001964 I 0.433
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.433
Gfo_R015467 Geospiza fortis Gfo_R015467 N 0.433
Aan_R005479 Calypte anna Aan_R005479 N 0.433
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.429
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.429
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.428
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.428
Traes_2AS_40ED2C7BC Triticum aestivum Traes_2AS_40ED2C7BC N 0.428
e_gw1.4.238.1 Coccomyxa subellipsoidea C169 e_gw1.4.238.1 N 0.425
ACOC_0000203201 Angiostrongylus costaricensis ACOC_0000203201 N 0.424
F775_31416 Aegilops tauschii F775_31416 N 0.423