Ciclev10025351m.g (Citrus clementina)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Ciclev10025351m.g T016083_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.747 0.859
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.629 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10025350m ARID/BRIGHT 235 320
Ciclev10025351m ARID/BRIGHT 235 320
Ciclev10025520m ARID/BRIGHT 235 320

Links

Other ARID/BRIGHT family TFs
Other Citrus clementina TFs

Invalid Input OrderBy

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action