fgenesh2_pg.C_Chr_07000337 (Micromonas sp RCC299)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 fgenesh2_pg.C_Chr_07000337 T016108_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.477 0.380
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.459 0.354
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.442 0.329
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
101593 ARID/BRIGHT 1445 1530

Links

Other ARID/BRIGHT family TFs
Other Micromonas sp RCC299 TFs

Invalid Input OrderBy

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action