CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene31799-v1.0-hybrid
(
Fragaria vesca
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
gene31799-v1.0-hybrid
T016114_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna31799.1-v1.0-hybrid
ARID/BRIGHT
322
409
RCTFDQVLSVFLKEIGDRGVVRPVPAVFGDRQHVDLFKLFCVVRDEGGYDLVSRRRLWSYVSKELGLDNGATAASVKLIYFKYLNELE
Links
Other
ARID/BRIGHT
family TFs
Other
Fragaria vesca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014844
Citrullus lanatus
Cla014844
N
0.472
Bra039294
Brassica rapa
Bra039294
N
0.457
Cucsa.106730
Cucumis sativus
Cucsa.106730
N
0.450
evm.TU.supercontig_214.10
Carica papaya
evm.TU.supercontig_214.10
N
0.448
MTR_1g073590
Medicago truncatula
MTR_1g073590
N
0.431
MTR_1g073380
Medicago truncatula
MTR_1g073380
N
0.431
Ciclev10019313m.g
Citrus clementina
Ciclev10019313m.g
N
0.429
orange1.1g006921m.g
Citrus sinensis
orange1.1g006921m.g
N
0.429
AT2G46040
Arabidopsis thaliana
AT2G46040
N
0.425
Traes_2BS_1E88E202F
Triticum aestivum
Traes_2BS_1E88E202F
N
0.423