Gorai.012G137700 (Gossypium raimondii)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Gorai.012G137700 T016127_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARID3
M06695_2.00
Arabidopsis thaliana
AAWWHNAAATYAAWW

WWTTRATTTNDWWTT
Dap-seq
OMalley et al.(2016)
AT2G17410_col_a
0.667 0.741
ARID6
M06694_2.00
Arabidopsis thaliana
HAATTRAWTTN

NAAWTYAATTD
Dap-seq
OMalley et al.(2016)
AT1G20910_col_a
0.615 0.800
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G137700.1 ARID/BRIGHT 178 263

Links

Other ARID/BRIGHT family TFs
Other Gossypium raimondii TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
1400010135 Ostreococcus tauri 1400010135 I 0.000
29600.m000548 Ricinus communis 29600.m000548 I 0.000
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.000
AAEL011425 Aedes aegypti AAEL011425 I 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACEP16621 Atta cephalotes ACEP16621 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.000
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
Bo2g160920 Brassica oleracea Bo2g160920 I 0.000
Bo7g091510 Brassica oleracea Bo7g091510 N 0.000
Bra025350 Brassica rapa Bra025350 N 0.000
Bra029371 Brassica rapa Bra029371 I 0.000
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.000
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
CapteG172235 Capitella teleta CapteG172235 I 0.000
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.000
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.000
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.000
cgd2_2120 Cryptosporidium parvum cgd2_2120 N 0.000
Chro.20230 Cryptosporidium hominis Chro.20230 N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
D915_02473 Fasciola hepatica D915_02473 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
ECPE_0000536801 Echinostoma caproni ECPE_0000536801 N 0.000
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.000
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.000
ENSGMOG00000010503 Gadus morhua ENSGMOG00000010503 N 0.000
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.000
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.000
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.000
ENSOGAG00000034481 Otolemur garnettii ENSOGAG00000034481 N 0.000
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.000
ETH_00031100 Eimeria tenella ETH_00031100 I 0.000
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.000
F775_27510 Aegilops tauschii F775_27510 I 0.000
GB47837 Apis mellifera GB47837 N 0.000
GD25013 Drosophila simulans FBgn0196325 N 0.000
GE11532 Drosophila yakuba FBgn0229332 N 0.000
GF12460 Drosophila ananassae FBgn0089497 N 0.000
GG19998 Drosophila erecta FBgn0112197 N 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GJ21774 Drosophila virilis FBgn0208892 N 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.000
GSMUA_Achr10G07270_001 Musa acuminata GSMUA_Achr10G07270_001 I 0.000
GSMUA_Achr11G07320_001 Musa acuminata GSMUA_Achr11G07320_001 I 0.000
GSMUA_Achr2G03630_001 Musa acuminata GSMUA_Achr2G03630_001 I 0.000
GSMUA_Achr9G21200_001 Musa acuminata GSMUA_Achr9G21200_001 I 0.000
GSMUA_AchrUn_randomG22010_001 Musa acuminata GSMUA_AchrUn_randomG22010_001 I 0.000
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.000
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.000
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.000
HMEL015307 Heliconius melpomene HMEL015307 N 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.000
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g6592 Steinernema feltiae L889_g6592 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
LPERR06G23570 Leersia perrieri LPERR06G23570 I 0.000
M7I_1578 Glarea lozoyensis M7I_1578 I 0.000
MBM_02410 Marssonina brunnea MBM_02410 I 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
mgf024995m Mimulus guttatus mgf024995m I 0.000
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.000
MLOC_78556 Hordeum vulgare MLOC_78556 I 0.000
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
OB06G35870 Oryza brachyantha OB06G35870 I 0.000
OBART06G28090 Oryza barthii OBART06G28090 I 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OGLUM06G29480 Oryza glumaepatula OGLUM06G29480 I 0.000
OLONG_007465 Oryza longistaminata OLONG_007465 I 0.000
OMERI06G28030 Oryza meridionalis OMERI06G28030 I 0.000
ONIVA06G31070 Oryza nivara ONIVA06G31070 I 0.000
OPUNC06G25640 Oryza punctata OPUNC06G25640 I 0.000
ORGLA06G0238300 Oryza glaberrima ORGLA06G0238300 I 0.000
ORUFI06G30030 Oryza rufipogon ORUFI06G30030 I 0.000
OS06G0728000 Oryza sativa OS06G0728000 I 0.000
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.000
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.000
Pavir.Db00040 Panicum virgatum Pavir.Db00040 I 0.000
Pavir.J04920 Panicum virgatum Pavir.J04920 I 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PPA02261 Pristionchus pacificus PPA02261 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.000
Sb10g030910 Sorghum bicolor Sb10g030910 I 0.000
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
Si007288m.g Setaria italica Si007288m.g I 0.000
SINV22588 Solenopsis invicta SINV22588 N 0.000
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.000
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.000
SNAPOd2T00005164001 Oikopleura dioica SNAPOd2T00005164001 N 0.000
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.000
Ssrp Drosophila melanogaster FBgn0010278 N 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
TRIUR3_13577 Triticum urartu TRIUR3_13577 I 0.000
TSTA_074230 Talaromyces stipitatus TSTA_074230 N 0.000
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000