Pavir.J12660 (Panicum virgatum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Pavir.J12660 T016172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J12660.1.p ARID/BRIGHT 34 123

Links

Other ARID/BRIGHT family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si012339m.g Setaria italica Si012339m.g N 0.705
GRMZM2G424651 Zea mays GRMZM2G424651 N 0.671
Sb06g001680 Sorghum bicolor Sb06g001680 N 0.671
MLOC_12524 Hordeum vulgare MLOC_12524 N 0.622
OB04G11920 Oryza brachyantha OB04G11920 N 0.617
OPUNC04G02270 Oryza punctata OPUNC04G02270 N 0.582
Traes_2AS_6F531FBB5 Triticum aestivum Traes_2AS_6F531FBB5 N 0.579
LPERR04G01540 Leersia perrieri LPERR04G01540 N 0.570
F775_04400 Aegilops tauschii F775_04400 N 0.542
Traes_2BS_1E88E202F Triticum aestivum Traes_2BS_1E88E202F N 0.540
BRADI5G00630 Brachypodium distachyon BRADI5G00630 N 0.538
OS04G0166400 Oryza sativa OS04G0166400 N 0.516
OMERI04G02470 Oryza meridionalis OMERI04G02470 N 0.516
BGIOSGA015617 Oryza indica BGIOSGA015617 N 0.516
ORUFI04G03050 Oryza rufipogon ORUFI04G03050 N 0.516
ONIVA08G18490 Oryza nivara ONIVA08G18490 N 0.516
OGLUM04G01970 Oryza glumaepatula OGLUM04G01970 N 0.516
BBA_01545 Beauveria bassiana BBA_01545 N 0.457
Si038535m.g Setaria italica Si038535m.g N 0.436