TF Information

HHAL000963-PA *(Halyomorpha halys)* ARID/BRIGHT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF01388 (ARID)	IPR001606	HHAL000963-PA	T016205_2.00	Misc (2018-Jan-19)
NCBI Gene Info: This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
retn M01664_2.00	Drosophila melanogaster	NDATHRNN	NNYDATHN	PBM Weirauch et al.(2014) pTH5119	0.682	0.924
retn M03590_2.00	Drosophila melanogaster	NNATTRATHN	NDATYAATNN	SELEX Nitta et al.(2015) retn_1	0.682	0.924
retn M05899_2.00	Drosophila melanogaster	AATYAAAM	KTTTRATT	B1H Zhu et al.(2011) retn_SANGER_5_FBgn0004795	0.682	0.924
retn M09768_2.00	Drosophila melanogaster	NNRATTAADN	NHTTAATYNN	Transfac Matys et al.(2006) I$DRI_01	0.682	0.924
ACYPI009013 M01655_2.00	Acyrthosiphon pisum	NDATHAADN	NHTTDATHN	PBM Weirauch et al.(2014) pTH5117	0.682	0.773
cfi-1 M01667_2.00	Caenorhabditis elegans	NNATHDNN	NNHDATNN	PBM Weirauch et al.(2014) pTH5118	0.617	0.742
ARID3A M01658_2.00	Microcebus murinus	NDATHAWDN	NHWTDATHN	PBM Weirauch et al.(2014) pTH9214	0.603	0.727
Arid3a M00115_2.00	Mus musculus	NDATHADDN	NHHTDATHN	PBM Badis et al.(2009) Arid3a_3875	0.603	0.727
Arid3a M01660_2.00	Mus musculus	NDATHAADN	NHTTDATHN	PBM Weirauch et al.(2014) pTH5169	0.603	0.727
ARID3A M01662_2.00	Procavia capensis	NNATHDNNN	NNNHDATNN	PBM Weirauch et al.(2014) pTH9384	0.603	0.727
Arid3a M02651_2.00	Mus musculus	ATYAAA	TTTRAT	SELEX Mathelier et al.(2014) MA0151.1	0.603	0.727
ARID3A M09766_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DRI1_01	0.603	0.727
DDB_G0275333 M01656_2.00	Dictyostelium discoideum	NNATHDNNNN	NNNNHDATNN	PBM Weirauch et al.(2014) pTH5168	0.567	0.485
Arid3b M01659_2.00	Mus musculus	NNDATTAAWWN	NWWTTAATHNN	PBM Weirauch et al.(2014) pTH4425	0.541	0.712
GSPATT00004674001 M01665_2.00	Paramecium tetraurelia	NNATYHNN	NNDRATNN	PBM Weirauch et al.(2014) pTH5124	0.515	0.394
TTHERM_00243900 M01666_2.00	Tetrahymena thermophila	NDDATYANN	NNTRATHHN	PBM Weirauch et al.(2014) pTH5128	0.483	0.439
For this family, TFs with SR scores > 0.422* will likely have a similar motif*