XP_002156471.1 (Hydra magnipapillata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 XP_002156471.1 T016332_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.439 0.360
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.428 0.337
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.428 0.337
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.428 0.337
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.428 0.337
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.428 0.337
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.428 0.337
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.424 0.314
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002156471.1 ARID/BRIGHT 27 113

Links

Other ARID/BRIGHT family TFs
Other Hydra magnipapillata TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CMM307C Cyanidioschyzon merolae CMM307C I 0.450
TTHERM_00243900 Tetrahymena thermophila TTHERM_00243900 D 0.439
ARID3A Procavia capensis ENSPCAG00000005137 D 0.428
ARID3A Pan troglodytes ENSPTRG00000010173 I 0.428
ENSPPYG00000009299 Pongo abelii ENSPPYG00000009299 I 0.428
ENSPANG00000019267 Papio anubis ENSPANG00000019267 I 0.428
ENSOARG00000018054 Ovis aries ENSOARG00000018054 I 0.428
ARID3A Ochotona princeps ENSOPRG00000007538 I 0.428
Arid3a Rattus norvegicus ENSRNOG00000026435 I 0.428
ENSSTOG00000006037 Ictidomys tridecemlineatus ENSSTOG00000006037 I 0.428
ENSP00000263620 Macaca fascicularis ENSP00000263620 I 0.428
Myotis_brandtii_ARID3A_10015586 Myotis brandtii Myotis_brandtii_ARID3A_10015586 I 0.428
ENSBTAP00000011354-D1 Bos grunniens ENSBTAP00000011354-D1 I 0.428
tetur09g05740 Tetranychus urticae tetur09g05740 I 0.428
ENSOARG00000010130 Ovis aries ENSOARG00000010130 I 0.428
ARID3A Tursiops truncatus ENSTTRG00000001472 I 0.428
ENSSSCG00000013414 Sus scrofa ENSSSCG00000013414 I 0.428
ARID3A Otolemur garnettii ENSOGAG00000013680 I 0.428
ARID3A Cavia porcellus ENSCPOG00000011820 I 0.428
Arid3a Mus musculus ENSMUSG00000019564 D 0.428
ENSCSAVG00000008674 Ciona savignyi ENSCSAVG00000008674 I 0.428
ARID3A Callithrix jacchus ENSCJAG00000020111 I 0.428
ARID3A Canis familiaris ENSCAFG00000019652 I 0.428
ENSAMEG00000003040 Ailuropoda melanoleuca ENSAMEG00000003040 I 0.428
ARID3A Bos taurus ENSBTAG00000008607 I 0.428
ARID3A Felis catus ENSFCAG00000027384 I 0.428
ENSCSAG00000012540 Chlorocebus sabaeus ENSCSAG00000012540 I 0.428
ARID3A Myotis lucifugus ENSMLUG00000011678 I 0.428
ARID3A Homo sapiens ENSG00000116017 D 0.428
ENSMPUG00000009298 Mustela putorius furo ENSMPUG00000009298 I 0.428
ARID3A Microcebus murinus ENSMICG00000010143 D 0.428
ARID3A Macaca mulatta ENSMMUG00000002278 I 0.428
ARID3A Loxodonta africana ENSLAFG00000005629 I 0.428
Aqu1.213820 Amphimedon queenslandica Aqu1.213820 I 0.426
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I 0.425
GSPATT00004674001 Paramecium tetraurelia GSPATT00004674001 D 0.424
XP_002160328.1 Hydra magnipapillata XP_002160328.1 I 0.423
GPLIN_000967000 Globodera pallida GPLIN_000967000 I 0.422
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I 0.422
LotgiG131492 Lottia gigantea LotgiG131492 I 0.422