CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002156471.1
(
Hydra magnipapillata
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
XP_002156471.1
T016332_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.439
0.360
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN
NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.428
0.337
Arid3a
M00115_2.00
Mus musculus
NDATHADDN
NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.428
0.337
Arid3a
M01660_2.00
Mus musculus
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.428
0.337
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN
NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.428
0.337
Arid3a
M02651_2.00
Mus musculus
ATYAAA
TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.428
0.337
ARID3A
M09766_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.428
0.337
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.424
0.314
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002156471.1
ARID/BRIGHT
27
113
KKKYFYRHIEALLSAFTSLYCKIPVIARKPLDIFILYNTVQKYGGFEQTLKNRMWSQIARELDLPRTMTSGAFTLKLKYVRLLYQFE
Links
Other
ARID/BRIGHT
family TFs
Other
Hydra magnipapillata
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy