CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0000082601
(
Hymenolepis nana
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
HNAJ_0000082601
T016569_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.467
0.424
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.444
0.424
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.444
0.424
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.444
0.424
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.444
0.424
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000082601-mRNA-1
ARID/BRIGHT
575
660
ERRQWLEHYFFFMESIEKPLTGLPQVVKQPLDLYRFYQAVRERGGVLEVIKTKRWKEISQLFNINASASAAYTLRKNYCKYLLDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Hymenolepis nana
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy