CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf01260-augustus-gene-0.7
(
Meloidogyne floridensis
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
maker-nMf.1.1.scaf01260-augustus-gene-0.7
T016605_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf01260-augustus-gene-0.7-mRNA-1
ARID/BRIGHT
200
281
ERRLFFERLVMLNEQHGEVLSGPPQVSKSPVDLYSLYYAVKLRGGFEKTIRDKIWKNLLECLETGQNIKELVEFAEKQKKKK
Links
Other
ARID/BRIGHT
family TFs
Other
Meloidogyne floridensis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM023832
Anopheles coluzzii
ACOM023832
N
0.463
ACRE_008210
Acremonium chrysogenum
ACRE_008210
N
0.513
ASIM_0001638701
Anisakis simplex
ASIM_0001638701
N
0.439
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
I
0.432
BOTBODRAFT_174219
Botryobasidium botryosum
BOTBODRAFT_174219
N
0.444
BOTBODRAFT_44712
Botryobasidium botryosum
BOTBODRAFT_44712
N
0.456
e_gw1.4.238.1
Coccomyxa subellipsoidea C169
e_gw1.4.238.1
N
0.465
GD20218
Drosophila simulans
FBgn0191696
N
0.440
Genemark.397_g
Heterobasidion annosum
Genemark.397_g
N
0.443
GK21672
Drosophila willistoni
FBgn0223657
N
0.464
GL12242
Drosophila persimilis
FBgn0149849
N
0.463
gw1.8.90.1
Volvox carteri
gw1.8.90.1
N
0.450
HCOI00647600
Haemonchus contortus
HCOI00647600
N
0.538
MESCA003685
Megaselia scalaris
MESCA003685
N
0.463
MhA1_Contig163.frz3.gene26
Meloidogyne hapla
MhA1_Contig163.frz3.gene26
I
0.432
Myotis_brandtii_Arid3c_10010321
Myotis brandtii
Myotis_brandtii_Arid3c_10010321
N
0.436
NV31651
Nasonia vitripennis
NV31651
N
0.512
OFLC_0000209301
Onchocerca flexuosa
OFLC_0000209301
N
0.487
PYU1_G003210
Pythium ultimum
PYU1_G003210
N
0.442
Solyc04g025930.1
Solanum lycopersicum
Solyc04g025930.1
N
0.490
SVUK_0000804601
Strongylus vulgaris
SVUK_0000804601
N
0.538
TC007519
Tribolium castaneum
TC007519
N
0.455