CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig163.frz3.gene26
(
Meloidogyne hapla
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
MhA1_Contig163.frz3.gene26
T016610_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.424
0.345
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig163.frz3.gene26
ARID/BRIGHT
163
250
ERRLFYERLVMLNEQNGEVLSGPPQVSKSPVDLYSLYYAVKQRGGFEKTIRDKIWKNLCVDANTEMQQSSAAGFQLRKHYQKYLLRLE
Links
Other
ARID/BRIGHT
family TFs
Other
Meloidogyne hapla
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy