CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPAL_0000433700
(
Strongyloides papillosus
)
ARID/BRIGHT,C2H2 ZF,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00096 (zf-C2H2)
PF02257 (RFX_DNA_binding)
IPR001606
IPR007087
IPR003150
SPAL_0000433700
T016771_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0000433700.1
ARID/BRIGHT
31
117
PEKDFFASYESFSKKKWGLKKKPQPYVNGTILNLYELYTIVKNFGGFMKVTNHELWPEVTKSLNLPGAVNETALIKYIYQRYLLYYE
SPAL_0000433700.1
RFX
612
689
INLTREWMNSSLRFDPTYESSIKRGKLYCDYVNHFNNKKMLSLNMKNFITLLRELFPKIRFTSEDGQANSCIVGIIQR
SPAL_0000433700.1
C2H2 ZF
888
912
ICEWQDCGIIFPNASQLYYHIYKTH
Links
Other
ARID/BRIGHT,C2H2 ZF,RFX
family TFs
Other
Strongyloides papillosus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVE_0285300
Strongyloides venezuelensis
SVE_0285300
N
0.973