CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0285300
(
Strongyloides venezuelensis
)
ARID/BRIGHT,C2H2 ZF,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00096 (zf-C2H2)
PF02257 (RFX_DNA_binding)
IPR001606
IPR007087
IPR003150
SVE_0285300
T016772_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0285300.1
ARID/BRIGHT
31
117
PEKDFFASYESFAKKKWGLKKQPQPYVNGTILNLYELYTIVKNFGGFMKVTNHELWPEVTKSLNLPGAVNETALIKYIYQRYLLYYE
SVE_0285300.1
RFX
612
689
INLTREWMNSSLRFDPTYESSIKRGKLYCDYVNHFNNKKMLSLNMKNFITLLRETFPRIKFTSEDGQANSCIVGIIQR
SVE_0285300.1
C2H2 ZF
873
897
ICEWQDCGIIFPNASQLYYHIYKTH
Links
Other
ARID/BRIGHT,C2H2 ZF,RFX
family TFs
Other
Strongyloides venezuelensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy