CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ARID2
(
Arabidopsis thaliana
)
ARID/BRIGHT,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00249 (Myb_DNA-binding)
IPR001606
IPR014778
AT4G11400
T016774_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G11400.1
ARID/BRIGHT
26
110
LRRLFDQALLVFLEEEGSIKPLPAVIGDGKNVDLFKLFVLVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRME
AT4G11400.1
Myb
472
518
CLRWTEEEEKRFKDMIIADPQSFWTNAAKNFPKKKREELVSYYFNVF
AT4G11400.2
ARID/BRIGHT
26
110
LRRLFDQALLVFLEEEGSIKPLPAVIGDGKNVDLFKLFVLVREREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRME
AT4G11400.2
Myb
472
518
CLRWTEEEEKRFKDMIIADPQSFWTNAAKNFPKKKREELVSYYFNVF
Links
Other
ARID/BRIGHT,Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10028531m.g
Eutrema salsugineum
Thhalv10028531m.g
N
0.754
Cagra.4698s0006
Capsella grandiflora
Cagra.4698s0006
N
0.742
Carubv10000553m.g
Capsella rubella
Carubv10000553m.g
N
0.734