CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0139s0170
(
Salix purpurea
)
ARID/BRIGHT,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF00249 (Myb_DNA-binding)
IPR001606
IPR014778
SapurV1A.0139s0170
T016808_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0139s0170.1.p
ARID/BRIGHT
58
133
KEICGLNSFLWILPSMLGNGQFVDLLNLFLAVREKGGCAAVSENGSWDLVVQESGFGLNLSPSVKLVYIKYLDSLE
SapurV1A.0139s0170.1.p
Myb
510
560
KLSWAVDEQKKFGAIVRSNPLSLDKCFWDEICRCFPSKRREDLVSYYYNVF
SapurV1A.0139s0170.2.p
ARID/BRIGHT
1
61
MLGNGQFVDLLNLFLAVREKGGCAAVSENGSWDLVVQESGFGLNLSPSVKLVYIKYLDSLE
Links
Other
ARID/BRIGHT,Myb/SANT
family TFs
Other
Salix purpurea
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0002s16250
Populus trichocarpa
POPTR_0002s16250
N
0.752
evm.TU.supercontig_214.10
Carica papaya
evm.TU.supercontig_214.10
N
0.482
evm.TU.supercontig_1258.5
Carica papaya
evm.TU.supercontig_1258.5
N
0.468
MDP0000470728
Malus domestica
MDP0000470728
N
0.460
TCM_005304
Theobroma cacao
TCM_005304
N
0.445
SELMODRAFT_404855
Selaginella moellendorffii
SELMODRAFT_404855
N
0.440
AT2G46040
Arabidopsis thaliana
AT2G46040
N
0.439
Gorai.001G168400
Gossypium raimondii
Gorai.001G168400
N
0.438
Bostr.25993s0166
Boechera stricta
Bostr.25993s0166
N
0.431