CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_18_chr2_1_0000997
(
Nectria haematococca
)
ARID/BRIGHT,Rap1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF09197 (Rap1-DNA-bind)
IPR001606
IPR015280
fgenesh1_pg.sca_18_chr2_1_0000997
T016846_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_18_chr2_1_0000997
Rap1
126
175
VLSRRSQQQQGNAIYQEYEAINPRHTWQSWRDRFVKRLQPRGMAALERLA
fgenesh1_pg.sca_18_chr2_1_0000997
ARID/BRIGHT
263
345
KRQLFYEDLNDFKTASKADIKERLNINGRTIDLFDLAMAIDDSQVDSQMYDWYGVAERLGFDDPDEDTATQLQVCFDEHLSEF
Links
Other
ARID/BRIGHT,Rap1
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy