CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_6-snap.470.1
(
Neurospora discreta
)
ARID/BRIGHT,Rap1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF09197 (Rap1-DNA-bind)
IPR001606
IPR015280
scaffold_6-snap.470.1
T016847_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_6-snap.470.1
Rap1
106
186
IDHVTAKGARPGGSATSNKTTRTPYTPEDDCILIHWVLQKERSGASIRGNQIYRELAQKYPRHTWQSWRDHFSKQYDRQNR
scaffold_6-snap.470.1
Rap1
242
311
AVAVPATGRVAFTQEDDQDLIRYLKEMKRQGESLQGSLIYKVFAEQHPRHGWQSWRNRWVKTLQATTNLD
scaffold_6-snap.470.1
ARID/BRIGHT
484
568
PREQFYVFLNRYNEVIEAKSVPWVTIGGKAVDMWDLWTAVTEQDVPANARDWQEIAELLDFDWIAEPDVPNQLQAAFQEHLAEFE
Links
Other
ARID/BRIGHT,Rap1
family TFs
Other
Neurospora discreta
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU04079
Neurospora crassa
NCU04079
N
0.815
NEUTE1DRAFT_131944
Neurospora tetrasperma
NEUTE1DRAFT_131944
N
0.793