ENSAMXG00000012189 (Astyanax mexicanus)
ARID/BRIGHT,RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSAMXG00000012189 T016862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000012550 ARID/BRIGHT 15 101
ENSAMXP00000012550 RFX 519 601

Links

Other ARID/BRIGHT,RFX family TFs
Other Astyanax mexicanus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK20526.1 Cannabis sativa PK20526.1 N 0.000
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N 0.000
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N 0.000
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.000
mgf011165m Mimulus guttatus mgf011165m N 0.000
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.000
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.000
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N 0.000
29767.m000200 Ricinus communis 29767.m000200 N 0.000
27568.m000253 Ricinus communis 27568.m000253 N 0.000
Pm002685 Prunus mume Pm002685 N 0.000
Cla018179 Citrullus lanatus Cla018179 N 0.000
Ca_21138 Cicer arietinum Ca_21138 N 0.000
Carubv10025657m.g Capsella rubella Carubv10025657m.g N 0.000
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.000
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N 0.000
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.000
Pavir.J32327 Panicum virgatum Pavir.J32327 N 0.000
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N 0.000
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.000
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.000
Lus10024384.g Linum usitatissimum Lus10024384.g N 0.000
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.000
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N 0.000
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N 0.000
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N 0.000
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.000
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
OGLUM03G30480 Oryza glumaepatula OGLUM03G30480 N 0.000
OBART03G30260 Oryza barthii OBART03G30260 N 0.000
OB03G37330 Oryza brachyantha OB03G37330 N 0.000
MTR_7g062120 Medicago truncatula MTR_7g062120 N 0.000
LPERR03G24920 Leersia perrieri LPERR03G24920 N 0.000
GRMZM2G098784 Zea mays GRMZM2G098784 N 0.000
GRMZM2G049159 Zea mays GRMZM2G049159 N 0.000
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.000
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.000
GLYMA03G10320 Glycine max GLYMA03G10320 N 0.000
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N 0.000
BGIOSGA010017 Oryza indica BGIOSGA010017 N 0.000
OMERI03G26460 Oryza meridionalis OMERI03G26460 N 0.000
ONIVA03G31510 Oryza nivara ONIVA03G31510 N 0.000
TCM_042705 Theobroma cacao TCM_042705 N 0.000
TCM_021920 Theobroma cacao TCM_021920 N 0.000
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N 0.000
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N 0.000
Si034417m.g Setaria italica Si034417m.g N 0.000
Sb01g039670 Sorghum bicolor Sb01g039670 N 0.000
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.000
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.000
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N 0.000
OS03G0690600 Oryza sativa OS03G0690600 N 0.000
ORGLA03G0287000 Oryza glaberrima ORGLA03G0287000 N 0.000
OPUNC03G27510 Oryza punctata OPUNC03G27510 N 0.000
SCL9 Arabidopsis thaliana AT2G37650 N 0.000