CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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arid2
(
Danio rerio
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSDARG00000007413
T016866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000011701
ARID/BRIGHT
15
101
KGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGFAKVSDKNQWVELVEDFQFPRSCSNAAFVLKQYYLRYLEKYE
ENSDARP00000011701
RFX
519
601
EKFTTQWLNAHFEVHSDGSVSRSEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLNGQAQIHVVGVRKRA
ENSDARP00000099617
ARID/BRIGHT
15
101
KGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGFAKVSDKNQWVELVEDFQFPRSCSNAAFVLKQYYLRYLEKYE
ENSDARP00000099617
RFX
519
601
EKFTTQWLNAHFEVHSDGSVSRSEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLNGQAQIHVVGVRKRA
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Danio rerio
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000012189
Astyanax mexicanus
ENSAMXG00000012189
N
0.891
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.867
ENSPSIG00000006686
Pelodiscus sinensis
ENSPSIG00000006686
N
0.830
Gfo_R004053
Geospiza fortis
Gfo_R004053
N
0.824
ENSTGUG00000006070
Taeniopygia guttata
ENSTGUG00000006070
N
0.824
ENSFALG00000010156
Ficedula albicollis
ENSFALG00000010156
N
0.824
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.824
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.818
ARID2
Anolis carolinensis
ENSACAG00000002402
N
0.818
Afo_R010305
Aptenodytes forsteri
Afo_R010305
N
0.818
Aan_R012350
Calypte anna
Aan_R012350
N
0.818
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.818
ARID2
Meleagris gallopavo
ENSMGAG00000009656
N
0.818
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.818
Ogr00113
Ophisaurus gracilis
Ogr00113
N
0.818
ENSAMEG00000013404
Ailuropoda melanoleuca
ENSAMEG00000013404
N
0.818
ARID2
Homo sapiens
ENSG00000189079
N
0.818
ENSGALG00000009665
Gallus gallus
ENSGALG00000009665
N
0.818
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.818
Pvit_11514
Pogona vitticeps
Pvit_11514
N
0.812
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.812
Arid2
Mus musculus
ENSMUSG00000033237
I
0.806
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.802
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.800
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.794
ENSTSYG00000008152
Tarsius syrichta
ENSTSYG00000008152
N
0.788
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.788
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.782
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.776
ENSGMOG00000016013
Gadus morhua
ENSGMOG00000016013
N
0.772
arid2
Tetraodon nigroviridis
ENSTNIG00000005771
N
0.764
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.758
arid2
Takifugu rubripes
ENSTRUG00000004073
N
0.752
ARID2
Felis catus
ENSFCAG00000012831
N
0.733