CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Arid2
(
Dipodomys ordii
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSDORG00000012273
T016867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000011540
ARID/BRIGHT
1
39
VSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYE
ENSDORP00000011540
RFX
453
531
EKFACQLNAHFEVNPDCSVSRADMYSYLSTCSKLARDILTSGFYKCLRTVFPNHSVKRVEDSSNNGQAHIHVVGVKRRA
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Dipodomys ordii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000008936
Ictidomys tridecemlineatus
ENSSTOG00000008936
N
0.974
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.974
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.974
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.974
ARID2
Callithrix jacchus
ENSCJAG00000013099
N
0.974
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.965
Afo_R010305
Aptenodytes forsteri
Afo_R010305
N
0.965
ENSMPUG00000000380
Mustela putorius furo
ENSMPUG00000000380
N
0.965
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.965
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.957
Arid2
Mus musculus
ENSMUSG00000033237
I
0.948
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.939
ENSTSYG00000008152
Tarsius syrichta
ENSTSYG00000008152
N
0.932
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.926
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.922
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
0.922
ENSNLEG00000017919
Nomascus leucogenys
ENSNLEG00000017919
N
0.910
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.852
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.800
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.748
ARID2
Pan troglodytes
ENSPTRG00000004853
N
0.742
ARID2
Felis catus
ENSFCAG00000012831
N
0.735
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.730
arid2
Tetraodon nigroviridis
ENSTNIG00000005771
N
0.730
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.722
arid2
Oryzias latipes
ENSORLG00000009649
N
0.704