ARID2 (Homo sapiens)
ARID/BRIGHT,RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSG00000189079 T016871_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene encodes a member of the AT-rich interactive domain (ARID)-containing family of DNA-binding proteins. Members of the ARID family have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation and chromatin structure modification. This protein functions as a subunit of the polybromo- and BRG1-associated factor or PBAF (SWI/SNF-B) chromatin remodeling complex which facilitates ligand-dependent transcriptional activation by nuclear receptors. Mutations in this gene are associated with hepatocellular carcinomas. A pseudogene of this gene is found on chromosome1. [provided by RefSeq, Dec 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000335044 ARID/BRIGHT 15 101
ENSP00000335044 RFX 521 603
ENSP00000397307 RFX 131 213
ENSP00000415650 RFX 372 454

Links

Other ARID/BRIGHT,RFX family TFs
Other Homo sapiens TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013404 Ailuropoda melanoleuca ENSAMEG00000013404 N 1.000
ENSOARG00000019554 Ovis aries ENSOARG00000019554 N 0.994
ARID2 Gorilla gorilla ENSGGOG00000013896 N 0.994
ENSPPYG00000004433 Pongo abelii ENSPPYG00000004433 N 0.994
Arid2 Mus musculus ENSMUSG00000033237 I 0.988
Arid2 Rattus norvegicus ENSRNOG00000004831 N 0.982
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.975
Gfo_R004053 Geospiza fortis Gfo_R004053 N 0.970
ENSTGUG00000006070 Taeniopygia guttata ENSTGUG00000006070 N 0.970
ENSPSIG00000006686 Pelodiscus sinensis ENSPSIG00000006686 N 0.970
ENSFALG00000010156 Ficedula albicollis ENSFALG00000010156 N 0.970
ENSTSYG00000008152 Tarsius syrichta ENSTSYG00000008152 N 0.966
ARID2 Meleagris gallopavo ENSMGAG00000009656 N 0.964
Aan_R012350 Calypte anna Aan_R012350 N 0.964
ENSGALG00000009665 Gallus gallus ENSGALG00000009665 N 0.964
ENSAPLG00000010567 Anas platyrhynchos ENSAPLG00000010567 N 0.964
Brh_R012991 Buceros rhinoceros Brh_R012991 N 0.964
Afo_R010305 Aptenodytes forsteri Afo_R010305 N 0.964
ARID2 Procavia capensis ENSPCAG00000015312 N 0.958
Ogr00113 Ophisaurus gracilis Ogr00113 N 0.958
Pvit_11514 Pogona vitticeps Pvit_11514 N 0.952
ARID2 Anolis carolinensis ENSACAG00000002402 N 0.945
ARID2 Canis familiaris ENSCAFG00000009335 N 0.921
ARID2 Felis catus ENSFCAG00000012831 N 0.909
arid2 Xenopus tropicalis XB-GENE-6070950 N 0.873
ENSLOCG00000016423 Lepisosteus oculatus ENSLOCG00000016423 N 0.855
arid2 Danio rerio ENSDARG00000007413 N 0.818
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N 0.801
ARID2 Equus caballus ENSECAG00000019032 N 0.801
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N 0.801
ARID2 Loxodonta africana ENSLAFG00000004415 N 0.801
ARID2 Microcebus murinus ENSMICG00000001487 N 0.801
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N 0.801
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N 0.801
ARID2 Vicugna pacos ENSVPAG00000004779 N 0.801
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N 0.801
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N 0.801
ARID2 Pteropus vampyrus ENSPVAG00000009834 N 0.801
ARID2 Bos taurus ENSBTAG00000011087 N 0.801
ARID2 Macaca mulatta ENSMMUG00000015962 N 0.801
ARID2 Myotis lucifugus ENSMLUG00000006908 N 0.799
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N 0.799
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N 0.798
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N 0.798
ARID2 Monodelphis domestica ENSMODG00000018527 N 0.797
Tal_R007164 Tyto alba Tal_R007164 N 0.797
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N 0.797
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N 0.796
arid2 Takifugu rubripes ENSTRUG00000004073 N 0.794
ENSAMXG00000012189 Astyanax mexicanus ENSAMXG00000012189 N 0.794
ENSONIG00000011901 Oreochromis niloticus ENSONIG00000011901 N 0.788
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N 0.787
arid2 Tetraodon nigroviridis ENSTNIG00000005771 N 0.776
ARID2 Pan troglodytes ENSPTRG00000004853 N 0.775
ENSPFOG00000011270 Poecilia formosa ENSPFOG00000011270 N 0.770
arid2 Gasterosteus aculeatus ENSGACG00000019522 N 0.764
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N 0.756
ARID2 Sorex araneus ENSSARG00000007415 N 0.750
ENSGMOG00000016013 Gadus morhua ENSGMOG00000016013 N 0.741
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I 0.718
ENSMPUG00000000380 Mustela putorius furo ENSMPUG00000000380 N 0.715
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N 0.713
ARID2 Callithrix jacchus ENSCJAG00000013099 N 0.709
ENSSTOG00000008936 Ictidomys tridecemlineatus ENSSTOG00000008936 N 0.709
ENSNLEG00000017919 Nomascus leucogenys ENSNLEG00000017919 N 0.709
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N 0.708
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.681
ACEP25962 Atta cephalotes ACEP25962 N 0.674
CLEC001081 Cimex lectularius CLEC001081 N 0.671
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N 0.671
ISCW014107 Ixodes scapularis ISCW014107 N 0.671
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N 0.670
SINV17530 Solenopsis invicta SINV17530 N 0.668
HelroG195033 Helobdella robusta HelroG195033 N 0.664
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N 0.659
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N 0.657
MDOA004973 Musca domestica MDOA004973 I 0.657
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N 0.656
PHUM060660 Pediculus humanus PHUM060660 N 0.655
PTSG_01032 Salpingoeca rosetta PTSG_01032 I 0.654