CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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arid2
(
Oryzias latipes
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSORLG00000009649
T016886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000012097
ARID/BRIGHT
2
43
YFQVSDKNQWVELAEDFNFPRSCSNAAFALRQYYLRYLEKYE
ENSORLP00000012097
RFX
462
544
EKFTLQWLNAHFETNSEGSVSRSEMYSEYLSTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEAKAGSQVQILLVGIRPRA
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Oryzias latipes
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
0.742
ARID2
Callithrix jacchus
ENSCJAG00000013099
N
0.731
ENSSTOG00000008936
Ictidomys tridecemlineatus
ENSSTOG00000008936
N
0.731
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.719
ENSTSYG00000008152
Tarsius syrichta
ENSTSYG00000008152
N
0.712
ENSMPUG00000000380
Mustela putorius furo
ENSMPUG00000000380
N
0.711
ENSNLEG00000017919
Nomascus leucogenys
ENSNLEG00000017919
N
0.705
Arid2
Dipodomys ordii
ENSDORG00000012273
N
0.704