CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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arid2
(
Tetraodon nigroviridis
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ENSTNIG00000005771
T016895_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000008486
ARID/BRIGHT
15
101
KGQAFLDELRQFHQSRGSPFRKIPFVGGKELDLNALYIRVVSLGGFAKVSEKNQWTELGEEFNFPRNCSNAAFALKQYYLRYLEKYE
ENSTNIP00000008486
RFX
521
603
EKFTLQWLNAHFEANPDGSVSRSEMYSEYLTTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEVKSSSQIQIFLVGLRRRT
ENSTNIP00000008487
ARID/BRIGHT
15
101
KGQAFLDELRQFHQSRGSPFRKIPFVGGKELDLNALYIRVVSLGGFAKVSEKNQWTELGEEFNFPRNCSNAAFALKQYYLRYLEKYE
ENSTNIP00000008487
RFX
521
603
EKFTLQWLNAHFEANPDGSVSRSEMYSEYLTTCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEVKSSSQIQIFLVGLRRRT
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Tetraodon nigroviridis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
arid2
Takifugu rubripes
ENSTRUG00000004073
N
0.952
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.909
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.885
ENSGMOG00000016013
Gadus morhua
ENSGMOG00000016013
N
0.880
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.873
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.782
ARID2
Homo sapiens
ENSG00000189079
N
0.776
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.776
Arid2
Mus musculus
ENSMUSG00000033237
I
0.776
ENSAMEG00000013404
Ailuropoda melanoleuca
ENSAMEG00000013404
N
0.776
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.770
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.770
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.770
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
0.767
arid2
Danio rerio
ENSDARG00000007413
N
0.764
ENSTGUG00000006070
Taeniopygia guttata
ENSTGUG00000006070
N
0.764
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.764
Gfo_R004053
Geospiza fortis
Gfo_R004053
N
0.764
Aan_R012350
Calypte anna
Aan_R012350
N
0.764
ENSPSIG00000006686
Pelodiscus sinensis
ENSPSIG00000006686
N
0.764
ENSFALG00000010156
Ficedula albicollis
ENSFALG00000010156
N
0.764
ARID2
Felis catus
ENSFCAG00000012831
N
0.762
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.761
ENSAMXG00000012189
Astyanax mexicanus
ENSAMXG00000012189
N
0.758
Afo_R010305
Aptenodytes forsteri
Afo_R010305
N
0.758
ARID2
Anolis carolinensis
ENSACAG00000002402
N
0.758
Ogr00113
Ophisaurus gracilis
Ogr00113
N
0.758
ARID2
Meleagris gallopavo
ENSMGAG00000009656
N
0.758
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.758
ENSGALG00000009665
Gallus gallus
ENSGALG00000009665
N
0.758
ARID2
Callithrix jacchus
ENSCJAG00000013099
N
0.748
ENSSTOG00000008936
Ictidomys tridecemlineatus
ENSSTOG00000008936
N
0.748
ENSTSYG00000008152
Tarsius syrichta
ENSTSYG00000008152
N
0.746
Pvit_11514
Pogona vitticeps
Pvit_11514
N
0.745
ENSMPUG00000000380
Mustela putorius furo
ENSMPUG00000000380
N
0.744
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.744
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.739
ENSNLEG00000017919
Nomascus leucogenys
ENSNLEG00000017919
N
0.730
Arid2
Dipodomys ordii
ENSDORG00000012273
N
0.730
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.721