CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R010305
(
Aptenodytes forsteri
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
Afo_R010305
T016935_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R010305
ARID/BRIGHT
15
101
KGLAFLDELRQVHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGFGKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYE
Afo_R010305
RFX
519
601
EKFACQWLNAHFEVNLDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPGNNGQAHIHVVGVKRRA
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Aptenodytes forsteri
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTGUG00000006070
Taeniopygia guttata
ENSTGUG00000006070
N
0.994
Gfo_R004053
Geospiza fortis
Gfo_R004053
N
0.994
ENSFALG00000010156
Ficedula albicollis
ENSFALG00000010156
N
0.994
ENSGALG00000009665
Gallus gallus
ENSGALG00000009665
N
0.988
Aan_R012350
Calypte anna
Aan_R012350
N
0.988
ARID2
Meleagris gallopavo
ENSMGAG00000009656
N
0.988
Brh_R012991
Buceros rhinoceros
Brh_R012991
N
0.988
ENSAPLG00000010567
Anas platyrhynchos
ENSAPLG00000010567
N
0.988
ENSPSIG00000006686
Pelodiscus sinensis
ENSPSIG00000006686
N
0.988
Ogr00113
Ophisaurus gracilis
Ogr00113
N
0.976
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
0.975
Pvit_11514
Pogona vitticeps
Pvit_11514
N
0.970
ARID2
Gorilla gorilla
ENSGGOG00000013896
N
0.970
ENSPPYG00000004433
Pongo abelii
ENSPPYG00000004433
N
0.970
ENSOARG00000019554
Ovis aries
ENSOARG00000019554
N
0.970
ENSTSYG00000008152
Tarsius syrichta
ENSTSYG00000008152
N
0.966
Arid2
Dipodomys ordii
ENSDORG00000012273
N
0.965
ARID2
Anolis carolinensis
ENSACAG00000002402
N
0.964
ARID2
Homo sapiens
ENSG00000189079
N
0.964
ENSAMEG00000013404
Ailuropoda melanoleuca
ENSAMEG00000013404
N
0.964
ARID2
Felis catus
ENSFCAG00000012831
N
0.960
ENSNLEG00000017919
Nomascus leucogenys
ENSNLEG00000017919
N
0.959
Arid2
Mus musculus
ENSMUSG00000033237
I
0.952
Arid2
Rattus norvegicus
ENSRNOG00000004831
N
0.945
ARID2
Procavia capensis
ENSPCAG00000015312
N
0.933
ARID2
Canis familiaris
ENSCAFG00000009335
N
0.885
arid2
Xenopus tropicalis
XB-GENE-6070950
N
0.861
ENSLOCG00000016423
Lepisosteus oculatus
ENSLOCG00000016423
N
0.848
arid2
Danio rerio
ENSDARG00000007413
N
0.818
ENSAMXG00000012189
Astyanax mexicanus
ENSAMXG00000012189
N
0.788
arid2
Takifugu rubripes
ENSTRUG00000004073
N
0.776
ENSONIG00000011901
Oreochromis niloticus
ENSONIG00000011901
N
0.776
ARID2
Pan troglodytes
ENSPTRG00000004853
N
0.775
arid2
Gasterosteus aculeatus
ENSGACG00000019522
N
0.764
arid2
Tetraodon nigroviridis
ENSTNIG00000005771
N
0.758
ENSPFOG00000011270
Poecilia formosa
ENSPFOG00000011270
N
0.758
ENSGMOG00000016013
Gadus morhua
ENSGMOG00000016013
N
0.734
ENSSTOG00000008936
Ictidomys tridecemlineatus
ENSSTOG00000008936
N
0.709
ARID2
Callithrix jacchus
ENSCJAG00000013099
N
0.709
ENSMPUG00000000380
Mustela putorius furo
ENSMPUG00000000380
N
0.703