CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AB04894.1
(
Alternaria brassicicola
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
AB04894.1
T016947_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB04894.1
ARID/BRIGHT
16
107
EYDDFLNTLAEYHEKRGTVLDREPKVGSRHIDLLRLYKRVNEEGGYDRVSDTKNNKLAWRKIATEFLPKSPSITTQAFLVKTAYYKNLAAYE
AB04894.1
RFX
611
695
ERSSQWLKTCFEEDTAGEITQIQLWSAYNAAFSEHMTSNPANFKALMPAKDFITNVSTTFGGASAQVLTVGGQPKYTIRGIRPRS
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Alternaria brassicicola
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTT_18578
Pyrenophora teres
PTT_18578
N
0.976
PTRG_01487
Pyrenophora triticirepentis
PTRG_01487
N
0.970
LEMA_P014580.1
Leptosphaeria maculans
LEMA_P014580.1
N
0.823