CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000225601
(
Angiostrongylus costaricensis
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
ACOC_0000225601
T016964_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000225601-mRNA-1
ARID/BRIGHT
26
112
KMSEFYQSLRQFYKRKWNAPLRLPAVQGVEVNLYRLYDTVMAFGGWQKVAIQEKWADVAEILGVGDDVVGGDHAIKLLYMRYLSKYE
ACOC_0000225601-mRNA-1
RFX
596
660
DQLTEQWIRQNCILDRTAVTPRGELYAAYVDDLRNQYHSLSGSLAMFSNVMKNIFPELTFKMAEN
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Angiostrongylus costaricensis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_08156
Dictyocaulus viviparus
DICVIV_08156
N
0.947
ANCCAN_16897
Ancylostoma caninum
ANCCAN_16897
N
0.926
ANCCEY_10921
Ancylostoma ceylanicum
ANCCEY_10921
N
0.919
NBR_0001588701
Nippostrongylus brasiliensis
NBR_0001588701
N
0.907
HPLM_0001875601
Haemonchus placei
HPLM_0001875601
N
0.893
HCOI01518500
Haemonchus contortus
HCOI01518500
N
0.893
HPBE_0000100701
Heligmosomoides bakeri
HPBE_0000100701
N
0.887
TELCIR_19453
Teladorsagia circumcincta
TELCIR_19453
N
0.866