CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g19714
(
Steinernema glaseri
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
L893_g19714
T016983_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g19714.t1
ARID/BRIGHT
29
115
KTNDFYRELNGFYRRKWGASLKLPNVDGFPFDLARLYEIVIDQGGWQKISSNEQWGDVAAALGYNQEITVVSHAIKQIYIRYLSKYE
L893_g19714.t1
RFX
586
663
DMLTVRWIRKNCIPTPGCSVNRGEVYAAYVNDMRNIYKSLSGSAGMFTNTLKACFRDVTVKPCEKAGSSYVHRSISNS
L893_g19714.t2
RFX
107
184
DMLTVRWIRKNCIPTPGCSVNRGEVYAAYVNDMRNIYKSLSGSAGMFTNTLKACFRDVTVKPCEKAGSSYVHRSISNS
L893_g19714.t3
ARID/BRIGHT
113
199
KTNDFYRELNGFYRRKWGASLKLPNVDGFPFDLARLYEIVIDQGGWQKISSNEQWGDVAAALGYNQEITVVSHAIKQIYIRYLSKYE
L893_g19714.t3
RFX
668
745
DMLTVRWIRKNCIPTPGCSVNRGEVYAAYVNDMRNIYKSLSGSAGMFTNTLKACFRDVTVKPCEKAGSSYVHRSISNS
L893_g19714.t4
ARID/BRIGHT
113
199
KTNDFYRELNGFYRRKWGASLKLPNVDGFPFDLARLYEIVIDQGGWQKISSNEQWGDVAAALGYNQEITVVSHAIKQIYIRYLSKYE
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Steinernema glaseri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g8401
Steinernema feltiae
L889_g8401
N
0.706
GPUH_0001348601
Gongylonema pulchrum
GPUH_0001348601
N
0.683
ANCDUO_13967
Ancylostoma duodenale
ANCDUO_13967
N
0.682
OESDEN_14901
Oesophagostomum dentatum
OESDEN_14901
N
0.680
SVUK_0000285501
Strongylus vulgaris
SVUK_0000285501
N
0.678
TCLT_0000036201
Thelazia callipaeda
TCLT_0000036201
N
0.677
OFLC_0000602701
Onchocerca flexuosa
OFLC_0000602701
N
0.676
WUBG_06587
Wuchereria bancrofti
WUBG_06587
N
0.676
SBAD_0000841501
Soboliphyme baturini
SBAD_0000841501
N
0.666