CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold113-EXSNAP2012.35
(
Pristionchus exspectatus
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
scaffold113-EXSNAP2012.35
T016991_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold113-EXSNAP2012.35
ARID/BRIGHT
629
715
RKHDFEQSLRQFYRRKWNVPLKPPAVHGIEFDLFKLFEVVMAFGGWQKVSYLEKWGDVAEQFGIKEDIMGGDNAVKTLYMRYLYKFE
scaffold113-EXSNAP2012.35
RFX
1175
1240
EQLTSQWIRGSCEKEEGTSTSRGDLYAAYVDDMRNVHHSLSGSLQMFTNMIKTIFNDVEFKLPEGG
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Pristionchus exspectatus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA22747
Pristionchus pacificus
PPA22747
N
0.801