CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTAC_0000733201
(
Hydatigera taeniaeformis
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
TTAC_0000733201
T016998_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTAC_0000733201-mRNA-1
ARID/BRIGHT
24
110
SEEQFATELAKLRGIPRSLLNSRPRLNGHPVNLVKLYNEVALRGGSKKVTSLSLWDEVAGAISLQRDCVNIGQAVKNVFQNYLEVFE
TTAC_0000733201-mRNA-1
RFX
683
766
REFAVFWLNKNYEVHPQSSFPRVQIYADYQKAHQAQFGSSSGGALSAGDFHSMIKMVFPPVDQVKVLVPNGNVEIHYNKLKHVD
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Hydatigera taeniaeformis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TASK_0000510801
Taenia asiatica
TASK_0000510801
N
0.964
TsM_000933800
Taenia solium
TsM_000933800
N
0.958
EmuJ_000462700
Echinococcus multilocularis
EmuJ_000462700
N
0.927
HmN_000393200
Hymenolepis microstoma
HmN_000393200
N
0.842
ECANG7_04262
Echinococcus canadensis
ECANG7_04262
N
0.812
MCOS_0000177001
Mesocestoides corti
MCOS_0000177001
N
0.782