CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh4_pg.C_scaffold_10000246
(
Volvox carteri
)
ARID/BRIGHT,SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF01342 (SAND)
IPR001606
IPR000770
fgenesh4_pg.C_scaffold_10000246
T016999_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh4_pg.C_scaffold_10000246
SAND
148
224
IPATVEVICGTLRGTYDVAKTKILYLYHLGGIREATPTEFERLGGRQATKKWKQSIRVVDSHGQPGKSLGEWLAGTA
fgenesh4_pg.C_scaffold_10000246
ARID/BRIGHT
269
369
LREQFHSQLLDFLTGRIDNPGTGPGRPLLPDSKFGPVTVGSHSFDLQKMYGKVRELGGYAALASNPNGWNQVAEKIGLDRAVVNTAHACRSVYEHYLLRAE
Links
Other
ARID/BRIGHT,SAND
family TFs
Other
Volvox carteri
TFs
0 Related TFs
">No related TF found