AMTR_s00001p00177580 (Amborella trichopoda)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		AMTR_s00001p00177580 T017000_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM96293 ARID/BRIGHT 34 119
ERM96293 Sox 251 318

Links

Other ARID/BRIGHT,Sox family TFs
Other Amborella trichopoda TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr3G00570_001 Musa acuminata GSMUA_Achr3G00570_001 I 0.791
GSMUA_Achr8G34160_001 Musa acuminata GSMUA_Achr8G34160_001 I 0.791
GSMUA_Achr1G14960_001 Musa acuminata GSMUA_Achr1G14960_001 I 0.778
PDK_20s1314261g001 Phoenix dactylifera PDK_20s1314261g001 N 0.732
PDK_20s1616391g001 Phoenix dactylifera PDK_20s1616391g001 N 0.725
Pm006137 Prunus mume Pm006137 I 0.717
Cucsa.271870 Cucumis sativus Cucsa.271870 I 0.715
Gorai.009G190400 Gossypium raimondii Gorai.009G190400 I 0.709
PRUPE_ppa009338mg Prunus persica PRUPE_ppa009338mg I 0.706
PK27175.1 Cannabis sativa PK27175.1 I 0.702
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.702
Eucgr.F03526 Eucalyptus grandis Eucgr.F03526 I 0.701