CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA029336
(
Oryza indica
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
BGIOSGA029336
T017009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA029336-PA
ARID/BRIGHT
20
105
DRAAFMDTLRRFHSLMGTKFMIPVIGGKEMDLHALYVEVTSRGGLAKVMEERKWREVMARFSFPATTTSASYVLRRYYLSLLHHYE
BGIOSGA029336-PA
Sox
227
294
PRPNRSAYNFFFKEKHPELKATHPHREREYSRMIGDAWNRLAADDKMVYYRHSAEDKERYKREMQEYN
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Oryza indica
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA09G0144900
Oryza glaberrima
ORGLA09G0144900
N
1.000
OMERI09G13880
Oryza meridionalis
OMERI09G13880
N
0.987
OPUNC09G16660
Oryza punctata
OPUNC09G16660
N
0.980
OB09G24850
Oryza brachyantha
OB09G24850
N
0.895
OBART09G18350
Oryza barthii
OBART09G18350
N
0.876
ONIVA09G19470
Oryza nivara
ONIVA09G19470
N
0.876
ORUFI09G19820
Oryza rufipogon
ORUFI09G19820
N
0.869
OGLUM09G18910
Oryza glumaepatula
OGLUM09G18910
N
0.869
LPERR09G14110
Leersia perrieri
LPERR09G14110
N
0.797
OLONG_021805
Oryza longistaminata
OLONG_021805
N
0.784
GSMUA_Achr3G00570_001
Musa acuminata
GSMUA_Achr3G00570_001
I
0.739
GSMUA_Achr8G34160_001
Musa acuminata
GSMUA_Achr8G34160_001
I
0.732