GSMUA_Achr6G21080_001 (Musa acuminata)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		GSMUA_Achr6G21080_001 T017035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMGB15
M06696_2.00 		Arabidopsis thaliana
TWTAWWATAWRGTWTW
WAWACYWTATWWTAWA		 Dap-seq
OMalley et al.(2016)
AT1G04880_col_a 		0.712 0.712
HMGB15
M06697_2.00 		Arabidopsis thaliana
TATAWHATATRGTWT
AWACYATATDWTATA		 Dap-seq
OMalley et al.(2016)
AT1G04880_colamp_a 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P21080_001 ARID/BRIGHT 49 134
GSMUA_Achr6P21080_001 Sox 260 327

Links

Other ARID/BRIGHT,Sox family TFs
Other Musa acuminata TFs

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48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action