OGLUM02G16420 (Oryza glumaepatula)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
OGLUM02G16420 T017051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G16420.1 ARID/BRIGHT 87 172
OGLUM02G16420.1 Sox 295 362
OGLUM02G16420.2 ARID/BRIGHT 77 162
OGLUM02G16420.2 Sox 285 352

Links

Other ARID/BRIGHT,Sox family TFs
Other Oryza glumaepatula TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR02G13140 Leersia perrieri LPERR02G13140 I 0.850
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.902
BGIOSGA008185 Oryza indica BGIOSGA008185 N 1.000
ORUFI02G16870 Oryza rufipogon ORUFI02G16870 N 1.000
OS02G0469900 Oryza sativa OS02G0469900 N 1.000
Sb04g017850 Sorghum bicolor Sb04g017850 N 0.895
Si017168m.g Setaria italica Si017168m.g N 0.876
Traes_6AS_A465E600A Triticum aestivum Traes_6AS_A465E600A N 0.908
TRIUR3_18598 Triticum urartu TRIUR3_18598 N 0.752
Pavir.Aa02269 Panicum virgatum Pavir.Aa02269 N 0.895
OPUNC02G14620 Oryza punctata OPUNC02G14620 N 0.987
ONIVA02G17640 Oryza nivara ONIVA02G17640 N 0.902
OMERI02G15910 Oryza meridionalis OMERI02G15910 N 1.000
OLONG_013998 Oryza longistaminata OLONG_013998 N 1.000
OBART02G16380 Oryza barthii OBART02G16380 N 1.000
OB0121G10030 Oryza brachyantha OB0121G10030 N 0.949
GRMZM2G024976 Zea mays GRMZM2G024976 N 0.882
BRADI3G43310 Brachypodium distachyon BRADI3G43310 N 0.908
Pavir.Ab01767 Panicum virgatum Pavir.Ab01767 N 0.889