CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_021805
(
Oryza longistaminata
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
OLONG_021805
T017054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_021805-R1
ARID/BRIGHT
28
113
DRAAFMDTLRRFHSLMGTKFMIPVIGGKEMDLHALYVEVTSRGGLAKVMEERKWREVMARFSFPATTTSASYVLRRYYLSLLHHYE
OLONG_021805-R1
Sox
178
226
DSEKHPELKATHPHREREYSKMIGDAWNRLADDDKMRSLQYQNHFQIDQ
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Oryza longistaminata
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI09G13880
Oryza meridionalis
OMERI09G13880
N
0.916
OPUNC09G16660
Oryza punctata
OPUNC09G16660
N
0.916
ONIVA09G19470
Oryza nivara
ONIVA09G19470
N
0.901
OBART09G18350
Oryza barthii
OBART09G18350
N
0.901
ORUFI09G19820
Oryza rufipogon
ORUFI09G19820
N
0.893
OGLUM09G18910
Oryza glumaepatula
OGLUM09G18910
N
0.893
BGIOSGA029336
Oryza indica
BGIOSGA029336
N
0.784
ORGLA09G0144900
Oryza glaberrima
ORGLA09G0144900
N
0.784
LPERR09G14110
Leersia perrieri
LPERR09G14110
N
0.748
OB09G24850
Oryza brachyantha
OB09G24850
N
0.732
GSMUA_Achr3G00570_001
Musa acuminata
GSMUA_Achr3G00570_001
I
0.710
GSMUA_Achr8G34160_001
Musa acuminata
GSMUA_Achr8G34160_001
I
0.702